SPG21

 

Full name: SPG21 abhydrolase domain containing, maspardin Alias Symbol: ACP33|GL010|BM-019|MAST|ABHD21
Type: protein-coding gene Cytoband: 15q22.31
Entrez ID: 51324 HGNC ID: HGNC:20373 Ensembl Gene: ENSG00000090487 OMIM ID: 608181
Drug and gene relationship at DGIdb

 

Expression of SPG21:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SPG21 51324 217827_s_at 0.3945 0.3411
GSE20347 SPG21 51324 217827_s_at 0.4481 0.0100
GSE23400 SPG21 51324 217827_s_at 0.5322 0.0000
GSE26886 SPG21 51324 217827_s_at -0.3937 0.1131
GSE29001 SPG21 51324 217827_s_at 0.4364 0.0933
GSE38129 SPG21 51324 217827_s_at 0.4704 0.0015
GSE45670 SPG21 51324 217827_s_at 0.1474 0.2155
GSE53622 SPG21 51324 89053 0.4932 0.0000
GSE53624 SPG21 51324 89053 0.5765 0.0000
GSE63941 SPG21 51324 217827_s_at -0.3042 0.4068
GSE77861 SPG21 51324 217827_s_at 0.5299 0.0299
GSE97050 SPG21 51324 A_23_P147450 0.2947 0.2028
SRP007169 SPG21 51324 RNAseq 0.3846 0.2359
SRP008496 SPG21 51324 RNAseq 0.6166 0.0166
SRP064894 SPG21 51324 RNAseq 0.4580 0.0012
SRP133303 SPG21 51324 RNAseq 0.2332 0.0096
SRP159526 SPG21 51324 RNAseq 0.4467 0.1891
SRP193095 SPG21 51324 RNAseq 0.1354 0.1223
SRP219564 SPG21 51324 RNAseq 0.2982 0.2788
TCGA SPG21 51324 RNAseq 0.1106 0.0176

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by SPG21 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SPG21:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SPG21 51324 7 3 20
GSE20123 SPG21 51324 7 3 20
GSE43470 SPG21 51324 4 6 33
GSE46452 SPG21 51324 3 7 49
GSE47630 SPG21 51324 8 10 22
GSE54993 SPG21 51324 5 6 59
GSE54994 SPG21 51324 6 7 40
GSE60625 SPG21 51324 4 0 7
GSE74703 SPG21 51324 4 3 29
GSE74704 SPG21 51324 3 3 14
TCGA SPG21 51324 10 16 70

Total number of gains: 61; Total number of losses: 64; Total Number of normals: 363.  


 

Somatic mutations of SPG21:

 

Generating mutation plots.

 

Highly correlated genes for SPG21:

 

Showing top 20/1248 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SPG21FAM89A0.761909303
SPG21GOT20.749809303
SPG21ZNF6410.749592303
SPG21ZNF6680.748189404
SPG21SMARCAD10.747657303
SPG21RAVER10.747348303
SPG21KLHL50.717937403
SPG21MRPL380.713961403
SPG21GRAMD1A0.707143404
SPG21CDK40.7048851009
SPG21RANBP10.704837909
SPG21RCN20.7019961009
SPG21DYRK20.701121403
SPG21CCT40.7007021009
SPG21LSM20.7002491008
SPG21SLC43A20.693827303
SPG21ELAVL10.6927621008
SPG21ZMYM60.690863505
SPG21GNG100.69073404
SPG21MRPS120.690038808

For details and further investigation, click here