RANBP1

 

Full name: RAN binding protein 1 Alias Symbol: HTF9A
Type: protein-coding gene Cytoband: 22q11.21
Entrez ID: 5902 HGNC ID: HGNC:9847 Ensembl Gene: ENSG00000099901 OMIM ID: 601180
Drug and gene relationship at DGIdb
Screen Evidence:

 

Expression of RANBP1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 RANBP1 5902 202483_s_at 1.0086 0.0632
GSE20347 RANBP1 5902 202483_s_at 0.8847 0.0003
GSE23400 RANBP1 5902 202483_s_at 1.1919 0.0000
GSE26886 RANBP1 5902 202483_s_at 0.8321 0.0002
GSE29001 RANBP1 5902 202483_s_at 1.2769 0.0559
GSE38129 RANBP1 5902 202483_s_at 1.2461 0.0000
GSE45670 RANBP1 5902 202483_s_at 0.8496 0.0003
GSE53622 RANBP1 5902 17680 0.8996 0.0000
GSE53624 RANBP1 5902 17680 1.0010 0.0000
GSE63941 RANBP1 5902 202483_s_at 1.4909 0.0035
GSE77861 RANBP1 5902 202483_s_at 1.0784 0.0017
GSE97050 RANBP1 5902 A_23_P91590 0.5494 0.1378
SRP007169 RANBP1 5902 RNAseq 1.5046 0.0000
SRP008496 RANBP1 5902 RNAseq 1.2367 0.0000
SRP064894 RANBP1 5902 RNAseq 1.2567 0.0000
SRP133303 RANBP1 5902 RNAseq 1.0280 0.0000
SRP159526 RANBP1 5902 RNAseq 0.9874 0.0000
SRP193095 RANBP1 5902 RNAseq 0.6775 0.0000
SRP219564 RANBP1 5902 RNAseq 1.0854 0.0215
TCGA RANBP1 5902 RNAseq 0.4311 0.0000

Upregulated datasets: 10; Downregulated datasets: 0.  

 

Survival by RANBP1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of RANBP1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 RANBP1 5902 5 7 18
GSE20123 RANBP1 5902 5 7 18
GSE43470 RANBP1 5902 4 7 32
GSE46452 RANBP1 5902 33 1 25
GSE47630 RANBP1 5902 8 5 27
GSE54993 RANBP1 5902 3 6 61
GSE54994 RANBP1 5902 12 7 34
GSE60625 RANBP1 5902 5 0 6
GSE74703 RANBP1 5902 4 5 27
GSE74704 RANBP1 5902 3 4 13
TCGA RANBP1 5902 27 17 52

Total number of gains: 109; Total number of losses: 66; Total Number of normals: 313.  

 

Somatic mutations of RANBP1:

 

Generating mutation plots.

 

Highly correlated genes for RANBP1:

 

Showing top 20/1645 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
RANBP1CDC450.82175412011
RANBP1ILF20.78815410010
RANBP1CKS1B0.77420613012
RANBP1RNASEH2A0.77372412012
RANBP1TUBB0.77157811011
RANBP1MCM70.76553312012
RANBP1CCT40.7647391009
RANBP1SNRPC0.76114211011
RANBP1MCM20.76038313013
RANBP1RFC40.76006713012
RANBP1BID0.75940112012
RANBP1MCM60.75778212012
RANBP1CDC60.7535151009
RANBP1PFDN20.753441009
RANBP1UBE2T0.752161908
RANBP1GINS20.75108413013
RANBP1CBX30.75099211011
RANBP1HPRT10.74973910010
RANBP1MYBL20.7483912012
RANBP1AURKB0.74756813012

For details and further investigation, click here