SPINK13

 

Full name: serine peptidase inhibitor, Kazal type 13 (putative) Alias Symbol: SPINK5L3|LiESP6|HESPINTOR|MGC149260
Type: protein-coding gene Cytoband: 5q32
Entrez ID: 153218 HGNC ID: HGNC:27200 Ensembl Gene: ENSG00000214510 OMIM ID: 615205
Drug and gene relationship at DGIdb

 

Expression of SPINK13:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 SPINK13 153218 233340_at -0.1371 0.6141
GSE26886 SPINK13 153218 233340_at 0.0196 0.8255
GSE45670 SPINK13 153218 233340_at 0.1505 0.0586
GSE53622 SPINK13 153218 31394 -1.1014 0.0000
GSE53624 SPINK13 153218 31394 -1.5381 0.0000
GSE63941 SPINK13 153218 233340_at 0.2547 0.3458
GSE77861 SPINK13 153218 233340_at -0.1225 0.2285
TCGA SPINK13 153218 RNAseq -4.6617 0.0301

Upregulated datasets: 0; Downregulated datasets: 3.  


 

Survival by SPINK13 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of SPINK13:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 SPINK13 153218 1 12 17
GSE20123 SPINK13 153218 1 13 16
GSE43470 SPINK13 153218 2 9 32
GSE46452 SPINK13 153218 0 27 32
GSE47630 SPINK13 153218 0 20 20
GSE54993 SPINK13 153218 9 1 60
GSE54994 SPINK13 153218 2 15 36
GSE60625 SPINK13 153218 0 0 11
GSE74703 SPINK13 153218 2 7 27
GSE74704 SPINK13 153218 1 8 11
TCGA SPINK13 153218 5 38 53

Total number of gains: 23; Total number of losses: 150; Total Number of normals: 315.  


 

Somatic mutations of SPINK13:

 

Generating mutation plots.

 

Highly correlated genes for SPINK13:

 

Showing top 20/211 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
SPINK13ATRNL10.78638303
SPINK13GYS20.725368303
SPINK13YOD10.718956303
SPINK13UPK1A0.71585303
SPINK13MXD10.714637303
SPINK13C1orf1160.711298303
SPINK13FNDC40.709057303
SPINK13PTK60.706715303
SPINK13IL20.704928303
SPINK13NCR10.704711403
SPINK13C3orf200.704419303
SPINK13UBL30.704318303
SPINK13S100A140.703303
SPINK13KRT780.698209303
SPINK13ARID5A0.695994303
SPINK13SFRP50.695223303
SPINK13NAPA0.693614303
SPINK13APOA10.692682403
SPINK13AIF1L0.692438303
SPINK13ZNF3650.689039303

For details and further investigation, click here