| Full name: solute carrier family 39 member 5 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 12q13.3 | ||
| Entrez ID: 283375 | HGNC ID: HGNC:20502 | Ensembl Gene: ENSG00000139540 | OMIM ID: 608730 |
| Drug and gene relationship at DGIdb | |||
Expression of SLC39A5:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SLC39A5 | 283375 | 1552281_at | 0.0919 | 0.6922 | |
| GSE26886 | SLC39A5 | 283375 | 1552281_at | 0.2240 | 0.0749 | |
| GSE45670 | SLC39A5 | 283375 | 1552281_at | 0.1458 | 0.1050 | |
| GSE53622 | SLC39A5 | 283375 | 29574 | 0.3841 | 0.0000 | |
| GSE53624 | SLC39A5 | 283375 | 29574 | 0.1774 | 0.0837 | |
| GSE63941 | SLC39A5 | 283375 | 1552281_at | -0.1095 | 0.4853 | |
| GSE77861 | SLC39A5 | 283375 | 1552281_at | -0.0081 | 0.9568 | |
| GSE97050 | SLC39A5 | 283375 | A_33_P3385006 | -0.0266 | 0.9164 | |
| TCGA | SLC39A5 | 283375 | RNAseq | -0.1150 | 0.9061 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by SLC39A5 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SLC39A5:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SLC39A5 | 283375 | 7 | 2 | 21 | |
| GSE20123 | SLC39A5 | 283375 | 7 | 1 | 22 | |
| GSE43470 | SLC39A5 | 283375 | 4 | 0 | 39 | |
| GSE46452 | SLC39A5 | 283375 | 8 | 1 | 50 | |
| GSE47630 | SLC39A5 | 283375 | 10 | 2 | 28 | |
| GSE54993 | SLC39A5 | 283375 | 0 | 5 | 65 | |
| GSE54994 | SLC39A5 | 283375 | 4 | 1 | 48 | |
| GSE60625 | SLC39A5 | 283375 | 0 | 0 | 11 | |
| GSE74703 | SLC39A5 | 283375 | 4 | 0 | 32 | |
| GSE74704 | SLC39A5 | 283375 | 4 | 1 | 15 | |
| TCGA | SLC39A5 | 283375 | 14 | 10 | 72 |
Total number of gains: 62; Total number of losses: 23; Total Number of normals: 403.
Somatic mutations of SLC39A5:
Generating mutation plots.
Highly correlated genes for SLC39A5:
Showing top 20/463 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SLC39A5 | GCM2 | 0.886072 | 3 | 0 | 3 |
| SLC39A5 | DCDC1 | 0.872366 | 3 | 0 | 3 |
| SLC39A5 | CHMP6 | 0.848276 | 4 | 0 | 4 |
| SLC39A5 | STRC | 0.84734 | 3 | 0 | 3 |
| SLC39A5 | PLA2G2C | 0.817678 | 3 | 0 | 3 |
| SLC39A5 | KCP | 0.796369 | 4 | 0 | 4 |
| SLC39A5 | CDH22 | 0.794053 | 4 | 0 | 3 |
| SLC39A5 | KLK2 | 0.793941 | 3 | 0 | 3 |
| SLC39A5 | C8orf74 | 0.786743 | 3 | 0 | 3 |
| SLC39A5 | CLTCL1 | 0.786547 | 4 | 0 | 3 |
| SLC39A5 | PABPN1L | 0.776249 | 3 | 0 | 3 |
| SLC39A5 | GRIK4 | 0.774418 | 4 | 0 | 4 |
| SLC39A5 | NKX6-3 | 0.769562 | 4 | 0 | 4 |
| SLC39A5 | MMP19 | 0.768245 | 4 | 0 | 4 |
| SLC39A5 | OR2A5 | 0.766858 | 3 | 0 | 3 |
| SLC39A5 | CHD5 | 0.766439 | 4 | 0 | 4 |
| SLC39A5 | TRIM10 | 0.765346 | 3 | 0 | 3 |
| SLC39A5 | CSH2 | 0.759933 | 3 | 0 | 3 |
| SLC39A5 | CLEC1B | 0.759615 | 3 | 0 | 3 |
| SLC39A5 | KRTAP4-8 | 0.758698 | 4 | 0 | 4 |
For details and further investigation, click here
