| Full name: single stranded DNA binding protein 3 | Alias Symbol: CSDP|SSDP|FLJ10355|SSDP1 | ||
| Type: protein-coding gene | Cytoband: 1p32.3 | ||
| Entrez ID: 23648 | HGNC ID: HGNC:15674 | Ensembl Gene: ENSG00000157216 | OMIM ID: 607390 |
Expression of SSBP3:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | SSBP3 | 23648 | 222482_at | -0.2341 | 0.7692 | |
| GSE20347 | SSBP3 | 23648 | 217991_x_at | 0.1864 | 0.3491 | |
| GSE23400 | SSBP3 | 23648 | 217991_x_at | -0.2314 | 0.0004 | |
| GSE26886 | SSBP3 | 23648 | 222482_at | -0.5267 | 0.0649 | |
| GSE29001 | SSBP3 | 23648 | 217991_x_at | -0.1780 | 0.5905 | |
| GSE38129 | SSBP3 | 23648 | 217991_x_at | -0.0591 | 0.7326 | |
| GSE45670 | SSBP3 | 23648 | 222482_at | -0.1841 | 0.4152 | |
| GSE53622 | SSBP3 | 23648 | 106755 | -0.4468 | 0.0000 | |
| GSE53624 | SSBP3 | 23648 | 106755 | -0.4022 | 0.0000 | |
| GSE63941 | SSBP3 | 23648 | 222482_at | -1.4375 | 0.0492 | |
| GSE77861 | SSBP3 | 23648 | 217991_x_at | -0.3514 | 0.0957 | |
| GSE97050 | SSBP3 | 23648 | A_23_P500333 | -0.4401 | 0.2027 | |
| SRP007169 | SSBP3 | 23648 | RNAseq | -0.4569 | 0.4448 | |
| SRP008496 | SSBP3 | 23648 | RNAseq | -0.6824 | 0.0894 | |
| SRP064894 | SSBP3 | 23648 | RNAseq | -0.4598 | 0.0249 | |
| SRP133303 | SSBP3 | 23648 | RNAseq | -0.5365 | 0.0043 | |
| SRP159526 | SSBP3 | 23648 | RNAseq | 0.3604 | 0.4978 | |
| SRP193095 | SSBP3 | 23648 | RNAseq | -0.5017 | 0.0057 | |
| SRP219564 | SSBP3 | 23648 | RNAseq | -0.3207 | 0.3361 | |
| TCGA | SSBP3 | 23648 | RNAseq | -0.2893 | 0.0001 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by SSBP3 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of SSBP3:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | SSBP3 | 23648 | 3 | 5 | 22 | |
| GSE20123 | SSBP3 | 23648 | 3 | 4 | 23 | |
| GSE43470 | SSBP3 | 23648 | 7 | 2 | 34 | |
| GSE46452 | SSBP3 | 23648 | 2 | 1 | 56 | |
| GSE47630 | SSBP3 | 23648 | 8 | 4 | 28 | |
| GSE54993 | SSBP3 | 23648 | 0 | 0 | 70 | |
| GSE54994 | SSBP3 | 23648 | 10 | 2 | 41 | |
| GSE60625 | SSBP3 | 23648 | 0 | 0 | 11 | |
| GSE74703 | SSBP3 | 23648 | 5 | 1 | 30 | |
| GSE74704 | SSBP3 | 23648 | 2 | 0 | 18 | |
| TCGA | SSBP3 | 23648 | 10 | 18 | 68 |
Total number of gains: 50; Total number of losses: 37; Total Number of normals: 401.
Somatic mutations of SSBP3:
Generating mutation plots.
Highly correlated genes for SSBP3:
Showing top 20/346 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| SSBP3 | PDE12 | 0.75149 | 3 | 0 | 3 |
| SSBP3 | C1orf122 | 0.746718 | 3 | 0 | 3 |
| SSBP3 | CTF1 | 0.744732 | 3 | 0 | 3 |
| SSBP3 | ZNF257 | 0.740895 | 3 | 0 | 3 |
| SSBP3 | FAM98B | 0.737059 | 3 | 0 | 3 |
| SSBP3 | OR7E24 | 0.718309 | 3 | 0 | 3 |
| SSBP3 | C15orf41 | 0.714918 | 4 | 0 | 4 |
| SSBP3 | MTMR12 | 0.713254 | 3 | 0 | 3 |
| SSBP3 | HSPA2 | 0.711592 | 3 | 0 | 3 |
| SSBP3 | TOB2 | 0.698332 | 3 | 0 | 3 |
| SSBP3 | PRMT6 | 0.694808 | 3 | 0 | 3 |
| SSBP3 | KCNJ10 | 0.6918 | 3 | 0 | 3 |
| SSBP3 | ZFYVE1 | 0.68975 | 3 | 0 | 3 |
| SSBP3 | SNIP1 | 0.688971 | 4 | 0 | 4 |
| SSBP3 | ZYG11B | 0.68522 | 4 | 0 | 4 |
| SSBP3 | NTAN1 | 0.679341 | 3 | 0 | 3 |
| SSBP3 | LRRC41 | 0.678543 | 3 | 0 | 3 |
| SSBP3 | PDK3 | 0.676734 | 3 | 0 | 3 |
| SSBP3 | KCTD21 | 0.668354 | 3 | 0 | 3 |
| SSBP3 | RGMA | 0.664798 | 3 | 0 | 3 |
For details and further investigation, click here
