FAM98B

 

Full name: family with sequence similarity 98 member B Alias Symbol: FLJ38426
Type: protein-coding gene Cytoband: 15q14
Entrez ID: 283742 HGNC ID: HGNC:26773 Ensembl Gene: ENSG00000171262 OMIM ID: 616142
Drug and gene relationship at DGIdb
Screen Evidence:

 

Expression of FAM98B:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 FAM98B 283742 225086_at -0.1390 0.8182
GSE26886 FAM98B 283742 225086_at 0.1170 0.6499
GSE45670 FAM98B 283742 225086_at -0.0987 0.5161
GSE53622 FAM98B 283742 28242 -0.0608 0.4587
GSE53624 FAM98B 283742 28242 0.3009 0.0000
GSE63941 FAM98B 283742 225086_at -1.0081 0.0157
GSE77861 FAM98B 283742 225086_at 0.1148 0.7603
GSE97050 FAM98B 283742 A_33_P3378772 -0.3658 0.3074
SRP007169 FAM98B 283742 RNAseq 0.7085 0.1228
SRP008496 FAM98B 283742 RNAseq 0.6965 0.0531
SRP064894 FAM98B 283742 RNAseq 0.1068 0.4751
SRP133303 FAM98B 283742 RNAseq 0.4283 0.0147
SRP159526 FAM98B 283742 RNAseq 0.4135 0.0959
SRP193095 FAM98B 283742 RNAseq 0.0597 0.6156
SRP219564 FAM98B 283742 RNAseq -0.0731 0.8440
TCGA FAM98B 283742 RNAseq 0.1156 0.1195

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by FAM98B expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of FAM98B:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 FAM98B 283742 2 7 21
GSE20123 FAM98B 283742 2 7 21
GSE43470 FAM98B 283742 4 5 34
GSE46452 FAM98B 283742 3 7 49
GSE47630 FAM98B 283742 8 11 21
GSE54993 FAM98B 283742 4 6 60
GSE54994 FAM98B 283742 5 7 41
GSE60625 FAM98B 283742 4 0 7
GSE74703 FAM98B 283742 4 4 28
GSE74704 FAM98B 283742 1 5 14
TCGA FAM98B 283742 11 18 67

Total number of gains: 48; Total number of losses: 77; Total Number of normals: 363.  


 

Somatic mutations of FAM98B:

 

Generating mutation plots.

 

Highly correlated genes for FAM98B:

 

Showing top 20/412 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
FAM98BSRSF60.859991303
FAM98BMAPK10.813426303
FAM98BPRICKLE20.811825303
FAM98BMXRA70.809153303
FAM98BKLHL130.799688303
FAM98BRBM70.784079303
FAM98BTBC1D190.778703303
FAM98BDSEL0.767999303
FAM98BATL10.764073303
FAM98BACSS30.763665303
FAM98BMACF10.758927303
FAM98BPYGO10.753288303
FAM98BSYNC0.751904303
FAM98BHYLS10.74712303
FAM98BCAND10.745108303
FAM98BEML10.743174303
FAM98BMCAM0.741146303
FAM98BTMEM30A0.740555404
FAM98BHSPA12A0.738306303
FAM98BSSBP30.737059303

For details and further investigation, click here