| Full name: stathmin 3 | Alias Symbol: SCLIP | ||
| Type: protein-coding gene | Cytoband: 20q13.33 | ||
| Entrez ID: 50861 | HGNC ID: HGNC:15926 | Ensembl Gene: ENSG00000197457 | OMIM ID: 608362 |
| Drug and gene relationship at DGIdb | |||
Expression of STMN3:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | STMN3 | 50861 | 222557_at | 0.3741 | 0.7346 | |
| GSE20347 | STMN3 | 50861 | 218207_s_at | -0.0316 | 0.5004 | |
| GSE23400 | STMN3 | 50861 | 218207_s_at | -0.0514 | 0.0083 | |
| GSE26886 | STMN3 | 50861 | 222557_at | 2.6256 | 0.0000 | |
| GSE29001 | STMN3 | 50861 | 218207_s_at | -0.1084 | 0.3028 | |
| GSE38129 | STMN3 | 50861 | 218207_s_at | -0.0618 | 0.2502 | |
| GSE45670 | STMN3 | 50861 | 222557_at | -0.0824 | 0.8774 | |
| GSE53622 | STMN3 | 50861 | 71794 | 0.5012 | 0.0000 | |
| GSE53624 | STMN3 | 50861 | 71794 | 0.6120 | 0.0000 | |
| GSE63941 | STMN3 | 50861 | 222557_at | -0.0848 | 0.9521 | |
| GSE77861 | STMN3 | 50861 | 222557_at | 1.0947 | 0.0666 | |
| GSE97050 | STMN3 | 50861 | A_24_P678104 | 0.1694 | 0.4808 | |
| SRP007169 | STMN3 | 50861 | RNAseq | 2.1616 | 0.0171 | |
| SRP008496 | STMN3 | 50861 | RNAseq | 2.8241 | 0.0000 | |
| SRP064894 | STMN3 | 50861 | RNAseq | 1.2201 | 0.0005 | |
| SRP133303 | STMN3 | 50861 | RNAseq | 0.3134 | 0.2220 | |
| SRP159526 | STMN3 | 50861 | RNAseq | 1.2324 | 0.0101 | |
| SRP193095 | STMN3 | 50861 | RNAseq | 1.6322 | 0.0000 | |
| TCGA | STMN3 | 50861 | RNAseq | 0.2446 | 0.0821 |
Upregulated datasets: 6; Downregulated datasets: 0.
Survival by STMN3 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of STMN3:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | STMN3 | 50861 | 14 | 2 | 14 | |
| GSE20123 | STMN3 | 50861 | 14 | 2 | 14 | |
| GSE43470 | STMN3 | 50861 | 11 | 1 | 31 | |
| GSE46452 | STMN3 | 50861 | 35 | 0 | 24 | |
| GSE47630 | STMN3 | 50861 | 25 | 1 | 14 | |
| GSE54993 | STMN3 | 50861 | 0 | 17 | 53 | |
| GSE54994 | STMN3 | 50861 | 29 | 0 | 24 | |
| GSE60625 | STMN3 | 50861 | 0 | 0 | 11 | |
| GSE74703 | STMN3 | 50861 | 10 | 0 | 26 | |
| GSE74704 | STMN3 | 50861 | 11 | 0 | 9 | |
| TCGA | STMN3 | 50861 | 44 | 4 | 48 |
Total number of gains: 193; Total number of losses: 27; Total Number of normals: 268.
Somatic mutations of STMN3:
Generating mutation plots.
Highly correlated genes for STMN3:
Showing top 20/333 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| STMN3 | SP4 | 0.742352 | 3 | 0 | 3 |
| STMN3 | DOCK11 | 0.719676 | 4 | 0 | 3 |
| STMN3 | KLF7 | 0.712178 | 5 | 0 | 3 |
| STMN3 | NOC4L | 0.709956 | 3 | 0 | 3 |
| STMN3 | WRAP53 | 0.706556 | 3 | 0 | 3 |
| STMN3 | SGTB | 0.706271 | 4 | 0 | 3 |
| STMN3 | PET117 | 0.704651 | 3 | 0 | 3 |
| STMN3 | STAT2 | 0.704226 | 3 | 0 | 3 |
| STMN3 | BCAM | 0.699875 | 3 | 0 | 3 |
| STMN3 | LRRCC1 | 0.694979 | 4 | 0 | 3 |
| STMN3 | METTL1 | 0.692618 | 3 | 0 | 3 |
| STMN3 | MCAM | 0.691962 | 4 | 0 | 3 |
| STMN3 | CDC42EP3 | 0.689821 | 4 | 0 | 4 |
| STMN3 | OSR1 | 0.687021 | 3 | 0 | 3 |
| STMN3 | INHBA | 0.681409 | 7 | 0 | 6 |
| STMN3 | AP5S1 | 0.670569 | 3 | 0 | 3 |
| STMN3 | ZC3H12C | 0.668571 | 3 | 0 | 3 |
| STMN3 | PLTP | 0.667717 | 3 | 0 | 3 |
| STMN3 | MEFV | 0.662428 | 3 | 0 | 3 |
| STMN3 | TWIST2 | 0.662359 | 4 | 0 | 4 |
For details and further investigation, click here
