STRN4

 

Full name: striatin 4 Alias Symbol: ZIN|PPP2R6C
Type: protein-coding gene Cytoband: 19q13.32
Entrez ID: 29888 HGNC ID: HGNC:15721 Ensembl Gene: ENSG00000090372 OMIM ID: 614767
Drug and gene relationship at DGIdb

 

Expression of STRN4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 STRN4 29888 217903_at 0.5023 0.2952
GSE20347 STRN4 29888 217903_at -0.2417 0.0547
GSE23400 STRN4 29888 217903_at 0.0555 0.4178
GSE26886 STRN4 29888 217903_at 0.3007 0.0705
GSE29001 STRN4 29888 217903_at -0.0125 0.9727
GSE38129 STRN4 29888 217903_at -0.0835 0.3628
GSE45670 STRN4 29888 217903_at -0.0079 0.9517
GSE53622 STRN4 29888 129591 -0.1431 0.0104
GSE53624 STRN4 29888 129591 0.0198 0.7171
GSE63941 STRN4 29888 217903_at 0.9969 0.0033
GSE77861 STRN4 29888 217903_at 0.1525 0.6012
GSE97050 STRN4 29888 A_23_P67399 0.1513 0.5808
SRP007169 STRN4 29888 RNAseq -0.0964 0.8131
SRP008496 STRN4 29888 RNAseq 0.0252 0.9341
SRP064894 STRN4 29888 RNAseq 0.1426 0.3668
SRP133303 STRN4 29888 RNAseq -0.0001 0.9997
SRP159526 STRN4 29888 RNAseq 0.2457 0.2933
SRP193095 STRN4 29888 RNAseq 0.1572 0.1323
SRP219564 STRN4 29888 RNAseq -0.1295 0.5234
TCGA STRN4 29888 RNAseq 0.0286 0.5047

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by STRN4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of STRN4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 STRN4 29888 4 4 22
GSE20123 STRN4 29888 4 3 23
GSE43470 STRN4 29888 3 11 29
GSE46452 STRN4 29888 45 1 13
GSE47630 STRN4 29888 8 7 25
GSE54993 STRN4 29888 17 4 49
GSE54994 STRN4 29888 5 13 35
GSE60625 STRN4 29888 9 0 2
GSE74703 STRN4 29888 3 7 26
GSE74704 STRN4 29888 4 1 15
TCGA STRN4 29888 16 16 64

Total number of gains: 118; Total number of losses: 67; Total Number of normals: 303.  


 

Somatic mutations of STRN4:

 

Generating mutation plots.

 

Highly correlated genes for STRN4:

 

Showing top 20/518 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
STRN4AKAP8L0.804008303
STRN4SENP50.77086303
STRN4DHX360.768695303
STRN4PACS10.765679404
STRN4ZNF5840.758738303
STRN4NUCKS10.751838303
STRN4NUDT190.747211303
STRN4POLR1C0.74538303
STRN4PWP10.738035303
STRN4NRGN0.724195303
STRN4SYNE20.723894303
STRN4MED10.723075303
STRN4MADD0.721471404
STRN4EEFSEC0.72065303
STRN4NUDT40.719826303
STRN4ZNF3620.71931404
STRN4PLEKHH10.718894303
STRN4SEC61A10.718263303
STRN4TTF10.715343303
STRN4PLCB20.714329303

For details and further investigation, click here