| Full name: TATA-box binding protein associated factor 13 | Alias Symbol: TAFII18 | ||
| Type: protein-coding gene | Cytoband: 1p13.3 | ||
| Entrez ID: 6884 | HGNC ID: HGNC:11546 | Ensembl Gene: ENSG00000197780 | OMIM ID: 600774 |
| Drug and gene relationship at DGIdb | |||
Screen Evidence:
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Expression of TAF13:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TAF13 | 6884 | 227278_at | -0.1745 | 0.7899 | |
| GSE20347 | TAF13 | 6884 | 205966_at | -0.1355 | 0.0421 | |
| GSE23400 | TAF13 | 6884 | 205966_at | -0.0244 | 0.0878 | |
| GSE26886 | TAF13 | 6884 | 227278_at | -0.7575 | 0.0003 | |
| GSE29001 | TAF13 | 6884 | 205966_at | -0.2448 | 0.5570 | |
| GSE38129 | TAF13 | 6884 | 205966_at | 0.0130 | 0.9591 | |
| GSE45670 | TAF13 | 6884 | 227278_at | 0.1900 | 0.3613 | |
| GSE53622 | TAF13 | 6884 | 82212 | -0.5447 | 0.0000 | |
| GSE53624 | TAF13 | 6884 | 82212 | -0.2466 | 0.0162 | |
| GSE63941 | TAF13 | 6884 | 227278_at | -1.3055 | 0.0071 | |
| GSE77861 | TAF13 | 6884 | 227278_at | -0.3848 | 0.0372 | |
| GSE97050 | TAF13 | 6884 | A_23_P35148 | -0.3632 | 0.5236 | |
| SRP007169 | TAF13 | 6884 | RNAseq | -0.6629 | 0.1149 | |
| SRP008496 | TAF13 | 6884 | RNAseq | -0.5703 | 0.0533 | |
| SRP064894 | TAF13 | 6884 | RNAseq | -0.2213 | 0.5136 | |
| SRP133303 | TAF13 | 6884 | RNAseq | 0.2269 | 0.2327 | |
| SRP159526 | TAF13 | 6884 | RNAseq | -0.7681 | 0.0184 | |
| SRP193095 | TAF13 | 6884 | RNAseq | -0.5090 | 0.0029 | |
| SRP219564 | TAF13 | 6884 | RNAseq | -0.2180 | 0.7306 | |
| TCGA | TAF13 | 6884 | RNAseq | -0.0936 | 0.2436 |
Upregulated datasets: 0; Downregulated datasets: 1.
Survival by TAF13 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TAF13:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TAF13 | 6884 | 0 | 12 | 18 | |
| GSE20123 | TAF13 | 6884 | 0 | 11 | 19 | |
| GSE43470 | TAF13 | 6884 | 0 | 8 | 35 | |
| GSE46452 | TAF13 | 6884 | 2 | 1 | 56 | |
| GSE47630 | TAF13 | 6884 | 9 | 5 | 26 | |
| GSE54993 | TAF13 | 6884 | 0 | 1 | 69 | |
| GSE54994 | TAF13 | 6884 | 7 | 4 | 42 | |
| GSE60625 | TAF13 | 6884 | 0 | 0 | 11 | |
| GSE74703 | TAF13 | 6884 | 0 | 6 | 30 | |
| GSE74704 | TAF13 | 6884 | 0 | 7 | 13 | |
| TCGA | TAF13 | 6884 | 8 | 26 | 62 |
Total number of gains: 26; Total number of losses: 81; Total Number of normals: 381.
Somatic mutations of TAF13:
Generating mutation plots.
Highly correlated genes for TAF13:
Showing top 20/331 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TAF13 | TXNDC17 | 0.721874 | 3 | 0 | 3 |
| TAF13 | CTTNBP2NL | 0.697209 | 6 | 0 | 6 |
| TAF13 | OR14J1 | 0.682203 | 3 | 0 | 3 |
| TAF13 | FBXW7 | 0.657108 | 4 | 0 | 4 |
| TAF13 | PRPF38B | 0.64999 | 6 | 0 | 5 |
| TAF13 | DUSP11 | 0.642378 | 5 | 0 | 5 |
| TAF13 | MAGI3 | 0.641429 | 4 | 0 | 3 |
| TAF13 | RAB21 | 0.63802 | 5 | 0 | 4 |
| TAF13 | ZFYVE16 | 0.635426 | 3 | 0 | 3 |
| TAF13 | BCL10 | 0.633536 | 6 | 0 | 4 |
| TAF13 | SLMAP | 0.630391 | 4 | 0 | 3 |
| TAF13 | IPMK | 0.629357 | 3 | 0 | 3 |
| TAF13 | RTCA | 0.628617 | 8 | 0 | 6 |
| TAF13 | CARHSP1 | 0.628056 | 4 | 0 | 3 |
| TAF13 | FBXO8 | 0.624803 | 4 | 0 | 3 |
| TAF13 | PDCD6IP | 0.621615 | 5 | 0 | 4 |
| TAF13 | SGMS2 | 0.620546 | 7 | 0 | 6 |
| TAF13 | DAAM1 | 0.618209 | 5 | 0 | 4 |
| TAF13 | NDFIP2 | 0.615068 | 5 | 0 | 3 |
| TAF13 | RAB10 | 0.612639 | 4 | 0 | 4 |
For details and further investigation, click here
