| Full name: T cell-interacting, activating receptor on myeloid cells 1 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 19q13.42 | ||
| Entrez ID: 441864 | HGNC ID: HGNC:37250 | Ensembl Gene: ENSG00000248385 | OMIM ID: 616802 |
| Drug and gene relationship at DGIdb | |||
Expression of TARM1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE53622 | TARM1 | 441864 | 58544 | -0.9139 | 0.0000 | |
| GSE53624 | TARM1 | 441864 | 58544 | -0.9952 | 0.0000 | |
| GSE97050 | TARM1 | 441864 | A_33_P3405769 | -0.7310 | 0.2070 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by TARM1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TARM1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TARM1 | 441864 | 3 | 4 | 23 | |
| GSE20123 | TARM1 | 441864 | 3 | 3 | 24 | |
| GSE43470 | TARM1 | 441864 | 2 | 11 | 30 | |
| GSE46452 | TARM1 | 441864 | 45 | 1 | 13 | |
| GSE47630 | TARM1 | 441864 | 8 | 6 | 26 | |
| GSE54993 | TARM1 | 441864 | 17 | 4 | 49 | |
| GSE54994 | TARM1 | 441864 | 4 | 14 | 35 | |
| GSE60625 | TARM1 | 441864 | 9 | 0 | 2 | |
| GSE74703 | TARM1 | 441864 | 2 | 7 | 27 | |
| GSE74704 | TARM1 | 441864 | 3 | 1 | 16 | |
| TCGA | TARM1 | 441864 | 19 | 15 | 62 |
Total number of gains: 115; Total number of losses: 66; Total Number of normals: 307.
Somatic mutations of TARM1:
Generating mutation plots.
Highly correlated genes for TARM1:
Showing top 20/63 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TARM1 | PHACTR4 | 0.698548 | 3 | 0 | 3 |
| TARM1 | TCP11L2 | 0.682244 | 3 | 0 | 3 |
| TARM1 | MPZL3 | 0.66729 | 3 | 0 | 3 |
| TARM1 | FAM135A | 0.665093 | 3 | 0 | 3 |
| TARM1 | ITSN2 | 0.664344 | 3 | 0 | 3 |
| TARM1 | AGFG2 | 0.664256 | 3 | 0 | 3 |
| TARM1 | GPX3 | 0.660166 | 3 | 0 | 3 |
| TARM1 | SLK | 0.650175 | 3 | 0 | 3 |
| TARM1 | TF | 0.648723 | 3 | 0 | 3 |
| TARM1 | KLK12 | 0.646648 | 3 | 0 | 3 |
| TARM1 | CAST | 0.643423 | 3 | 0 | 3 |
| TARM1 | CRISP3 | 0.640704 | 3 | 0 | 3 |
| TARM1 | GABPB2 | 0.637441 | 3 | 0 | 3 |
| TARM1 | YY1AP1 | 0.636272 | 3 | 0 | 3 |
| TARM1 | TEAD3 | 0.63372 | 3 | 0 | 3 |
| TARM1 | PRAMEF10 | 0.63359 | 3 | 0 | 3 |
| TARM1 | ANKRD31 | 0.633104 | 3 | 0 | 3 |
| TARM1 | ATG9B | 0.62771 | 3 | 0 | 3 |
| TARM1 | ABHD5 | 0.625249 | 3 | 0 | 3 |
| TARM1 | ATP13A4 | 0.614856 | 3 | 0 | 3 |
For details and further investigation, click here
