| Full name: GA binding protein transcription factor subunit beta 2 | Alias Symbol: MGC29891 | ||
| Type: protein-coding gene | Cytoband: 1q21.3 | ||
| Entrez ID: 126626 | HGNC ID: HGNC:28441 | Ensembl Gene: ENSG00000143458 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of GABPB2:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | GABPB2 | 126626 | 228466_at | -0.5536 | 0.4277 | |
| GSE26886 | GABPB2 | 126626 | 228466_at | -0.7285 | 0.0003 | |
| GSE45670 | GABPB2 | 126626 | 228466_at | 0.0125 | 0.9656 | |
| GSE53622 | GABPB2 | 126626 | 127488 | -0.8775 | 0.0000 | |
| GSE53624 | GABPB2 | 126626 | 127488 | -0.5946 | 0.0000 | |
| GSE63941 | GABPB2 | 126626 | 228466_at | -0.3812 | 0.5985 | |
| GSE77861 | GABPB2 | 126626 | 228466_at | -0.0224 | 0.9389 | |
| GSE97050 | GABPB2 | 126626 | A_23_P73208 | -0.5115 | 0.3051 | |
| SRP007169 | GABPB2 | 126626 | RNAseq | -0.5059 | 0.3140 | |
| SRP008496 | GABPB2 | 126626 | RNAseq | 0.5611 | 0.1753 | |
| SRP064894 | GABPB2 | 126626 | RNAseq | -0.2377 | 0.1845 | |
| SRP133303 | GABPB2 | 126626 | RNAseq | -0.0621 | 0.7045 | |
| SRP159526 | GABPB2 | 126626 | RNAseq | 0.2831 | 0.1168 | |
| SRP193095 | GABPB2 | 126626 | RNAseq | -0.0113 | 0.9244 | |
| SRP219564 | GABPB2 | 126626 | RNAseq | 0.0897 | 0.8072 | |
| TCGA | GABPB2 | 126626 | RNAseq | -0.0128 | 0.8805 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by GABPB2 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of GABPB2:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | GABPB2 | 126626 | 14 | 0 | 16 | |
| GSE20123 | GABPB2 | 126626 | 14 | 0 | 16 | |
| GSE43470 | GABPB2 | 126626 | 6 | 1 | 36 | |
| GSE46452 | GABPB2 | 126626 | 2 | 1 | 56 | |
| GSE47630 | GABPB2 | 126626 | 14 | 0 | 26 | |
| GSE54993 | GABPB2 | 126626 | 0 | 4 | 66 | |
| GSE54994 | GABPB2 | 126626 | 15 | 0 | 38 | |
| GSE60625 | GABPB2 | 126626 | 0 | 0 | 11 | |
| GSE74703 | GABPB2 | 126626 | 6 | 1 | 29 | |
| GSE74704 | GABPB2 | 126626 | 7 | 0 | 13 | |
| TCGA | GABPB2 | 126626 | 37 | 2 | 57 |
Total number of gains: 115; Total number of losses: 9; Total Number of normals: 364.
Somatic mutations of GABPB2:
Generating mutation plots.
Highly correlated genes for GABPB2:
Showing top 20/99 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| GABPB2 | TTC17 | 0.775228 | 3 | 0 | 3 |
| GABPB2 | PAXBP1 | 0.69248 | 3 | 0 | 3 |
| GABPB2 | NR2C2 | 0.692238 | 3 | 0 | 3 |
| GABPB2 | BCOR | 0.664764 | 4 | 0 | 3 |
| GABPB2 | SOD1 | 0.654476 | 3 | 0 | 3 |
| GABPB2 | SERPINB6 | 0.653804 | 4 | 0 | 3 |
| GABPB2 | ERCC6L2 | 0.652913 | 3 | 0 | 3 |
| GABPB2 | ITSN2 | 0.648625 | 4 | 0 | 3 |
| GABPB2 | TF | 0.641522 | 4 | 0 | 3 |
| GABPB2 | TARM1 | 0.637441 | 3 | 0 | 3 |
| GABPB2 | PHACTR4 | 0.629993 | 4 | 0 | 3 |
| GABPB2 | ALDH9A1 | 0.629671 | 5 | 0 | 4 |
| GABPB2 | NLRP8 | 0.624896 | 3 | 0 | 3 |
| GABPB2 | DCLK1 | 0.623151 | 3 | 0 | 3 |
| GABPB2 | TBRG1 | 0.617787 | 3 | 0 | 3 |
| GABPB2 | ZNF682 | 0.611613 | 3 | 0 | 3 |
| GABPB2 | KIAA0232 | 0.611455 | 4 | 0 | 3 |
| GABPB2 | FCHO2 | 0.60951 | 4 | 0 | 3 |
| GABPB2 | PEBP1 | 0.609137 | 3 | 0 | 3 |
| GABPB2 | SIAE | 0.608926 | 3 | 0 | 3 |
For details and further investigation, click here
