TRABD

 

Full name: TraB domain containing Alias Symbol: PP2447
Type: protein-coding gene Cytoband: 22q13.33
Entrez ID: 80305 HGNC ID: HGNC:28805 Ensembl Gene: ENSG00000170638 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of TRABD:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 TRABD 80305 225360_at 0.1920 0.6692
GSE20347 TRABD 80305 221807_s_at 0.2712 0.0926
GSE23400 TRABD 80305 221807_s_at 0.0410 0.5289
GSE26886 TRABD 80305 232706_s_at 0.5199 0.0036
GSE29001 TRABD 80305 221807_s_at 0.2528 0.1367
GSE38129 TRABD 80305 221807_s_at 0.4420 0.0013
GSE45670 TRABD 80305 232706_s_at -0.0163 0.9078
GSE53622 TRABD 80305 33801 0.4572 0.0000
GSE53624 TRABD 80305 33801 0.3778 0.0000
GSE63941 TRABD 80305 225360_at 0.5957 0.0012
GSE77861 TRABD 80305 232706_s_at 0.2414 0.3210
GSE97050 TRABD 80305 A_33_P3862354 0.6057 0.2104
SRP007169 TRABD 80305 RNAseq -0.2069 0.5588
SRP008496 TRABD 80305 RNAseq -0.5811 0.0107
SRP064894 TRABD 80305 RNAseq 0.6702 0.0081
SRP133303 TRABD 80305 RNAseq 0.1058 0.5164
SRP159526 TRABD 80305 RNAseq 0.3213 0.0627
SRP193095 TRABD 80305 RNAseq 0.2972 0.0698
SRP219564 TRABD 80305 RNAseq 0.5719 0.1622
TCGA TRABD 80305 RNAseq 0.1685 0.0012

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by TRABD expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of TRABD:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TRABD 80305 3 8 19
GSE20123 TRABD 80305 3 8 19
GSE43470 TRABD 80305 2 8 33
GSE46452 TRABD 80305 31 2 26
GSE47630 TRABD 80305 9 4 27
GSE54993 TRABD 80305 4 6 60
GSE54994 TRABD 80305 11 8 34
GSE60625 TRABD 80305 5 0 6
GSE74703 TRABD 80305 2 6 28
GSE74704 TRABD 80305 1 4 15
TCGA TRABD 80305 26 16 54

Total number of gains: 97; Total number of losses: 70; Total Number of normals: 321.  

 

Somatic mutations of TRABD:

 

Generating mutation plots.

 

Highly correlated genes for TRABD:

 

Showing top 20/308 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TRABDCD220.758206303
TRABDMTFP10.748208404
TRABDLILRB20.699363303
TRABDALPL0.698173303
TRABDGPSM30.663186303
TRABDPAX50.661352303
TRABDLILRA30.659146303
TRABDZNF3410.652807303
TRABDSFN0.652733303
TRABDOIP50.651395303
TRABDFBXO20.650629303
TRABDMIR1420.649304404
TRABDLRRC8E0.647862404
TRABDLHX10.644895403
TRABDLEMD10.642397403
TRABDRCC20.640345404
TRABDAKNA0.638568303
TRABDMYO190.638225808
TRABDTOMM400.638049605
TRABDIRF60.635369404

For details and further investigation, click here