| Full name: trafficking protein particle complex 9 | Alias Symbol: IKBKBBP|NIBP|KIAA1882|T1|TRS120|MRT13 | ||
| Type: protein-coding gene | Cytoband: 8q24.3 | ||
| Entrez ID: 83696 | HGNC ID: HGNC:30832 | Ensembl Gene: ENSG00000167632 | OMIM ID: 611966 |
| Drug and gene relationship at DGIdb | |||
Expression of TRAPPC9:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TRAPPC9 | 83696 | 56829_at | 0.0830 | 0.8068 | |
| GSE20347 | TRAPPC9 | 83696 | 56829_at | -0.0090 | 0.9412 | |
| GSE23400 | TRAPPC9 | 83696 | 56829_at | -0.0814 | 0.0091 | |
| GSE26886 | TRAPPC9 | 83696 | 56829_at | 0.4473 | 0.0131 | |
| GSE29001 | TRAPPC9 | 83696 | 56829_at | -0.0287 | 0.9084 | |
| GSE38129 | TRAPPC9 | 83696 | 56829_at | -0.0993 | 0.2460 | |
| GSE45670 | TRAPPC9 | 83696 | 56829_at | 0.0545 | 0.4205 | |
| GSE53622 | TRAPPC9 | 83696 | 124968 | -0.2960 | 0.0000 | |
| GSE53624 | TRAPPC9 | 83696 | 124968 | -0.2151 | 0.0001 | |
| GSE63941 | TRAPPC9 | 83696 | 56829_at | 0.1127 | 0.7009 | |
| GSE77861 | TRAPPC9 | 83696 | 56829_at | -0.0209 | 0.8407 | |
| GSE97050 | TRAPPC9 | 83696 | A_23_P73420 | -0.1866 | 0.5391 | |
| SRP007169 | TRAPPC9 | 83696 | RNAseq | -0.8388 | 0.0240 | |
| SRP008496 | TRAPPC9 | 83696 | RNAseq | -0.5828 | 0.0067 | |
| SRP064894 | TRAPPC9 | 83696 | RNAseq | 0.0828 | 0.6210 | |
| SRP133303 | TRAPPC9 | 83696 | RNAseq | -0.1975 | 0.2718 | |
| SRP159526 | TRAPPC9 | 83696 | RNAseq | 0.0546 | 0.7046 | |
| SRP193095 | TRAPPC9 | 83696 | RNAseq | 0.2706 | 0.0759 | |
| SRP219564 | TRAPPC9 | 83696 | RNAseq | 0.3559 | 0.4111 | |
| TCGA | TRAPPC9 | 83696 | RNAseq | -0.1632 | 0.0007 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by TRAPPC9 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TRAPPC9:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TRAPPC9 | 83696 | 16 | 0 | 14 | |
| GSE20123 | TRAPPC9 | 83696 | 16 | 0 | 14 | |
| GSE43470 | TRAPPC9 | 83696 | 22 | 2 | 19 | |
| GSE46452 | TRAPPC9 | 83696 | 27 | 0 | 32 | |
| GSE47630 | TRAPPC9 | 83696 | 24 | 0 | 16 | |
| GSE54993 | TRAPPC9 | 83696 | 0 | 25 | 45 | |
| GSE54994 | TRAPPC9 | 83696 | 39 | 1 | 13 | |
| GSE60625 | TRAPPC9 | 83696 | 3 | 4 | 4 | |
| GSE74703 | TRAPPC9 | 83696 | 19 | 1 | 16 | |
| GSE74704 | TRAPPC9 | 83696 | 10 | 0 | 10 | |
| TCGA | TRAPPC9 | 83696 | 64 | 4 | 28 |
Total number of gains: 240; Total number of losses: 37; Total Number of normals: 211.
Somatic mutations of TRAPPC9:
Generating mutation plots.
Highly correlated genes for TRAPPC9:
Showing top 20/646 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TRAPPC9 | RAB3IL1 | 0.862382 | 3 | 0 | 3 |
| TRAPPC9 | SPINT3 | 0.802512 | 3 | 0 | 3 |
| TRAPPC9 | NOX1 | 0.782372 | 4 | 0 | 4 |
| TRAPPC9 | ABCA4 | 0.779352 | 3 | 0 | 3 |
| TRAPPC9 | LMX1B | 0.770261 | 3 | 0 | 3 |
| TRAPPC9 | RASSF7 | 0.765581 | 3 | 0 | 3 |
| TRAPPC9 | LY6H | 0.759575 | 3 | 0 | 3 |
| TRAPPC9 | SLC27A5 | 0.749473 | 3 | 0 | 3 |
| TRAPPC9 | ADD2 | 0.742758 | 3 | 0 | 3 |
| TRAPPC9 | HPS1 | 0.738186 | 5 | 0 | 5 |
| TRAPPC9 | FOLH1 | 0.735049 | 4 | 0 | 4 |
| TRAPPC9 | PLA2G2D | 0.727868 | 5 | 0 | 5 |
| TRAPPC9 | PNMA6A | 0.72628 | 3 | 0 | 3 |
| TRAPPC9 | GHRHR | 0.714077 | 3 | 0 | 3 |
| TRAPPC9 | LRCH4 | 0.71221 | 4 | 0 | 3 |
| TRAPPC9 | PTCRA | 0.710999 | 4 | 0 | 3 |
| TRAPPC9 | TRPM3 | 0.709343 | 5 | 0 | 4 |
| TRAPPC9 | FSCN3 | 0.702635 | 4 | 0 | 3 |
| TRAPPC9 | NCR3 | 0.700194 | 5 | 0 | 3 |
| TRAPPC9 | OSBPL5 | 0.696686 | 3 | 0 | 3 |
For details and further investigation, click here
