| Full name: tripartite motif containing 41 | Alias Symbol: MGC1127|RINCK | ||
| Type: protein-coding gene | Cytoband: 5q35.3 | ||
| Entrez ID: 90933 | HGNC ID: HGNC:19013 | Ensembl Gene: ENSG00000146063 | OMIM ID: 610530 |
| Drug and gene relationship at DGIdb | |||
Expression of TRIM41:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TRIM41 | 90933 | 226445_s_at | 0.0080 | 0.9883 | |
| GSE26886 | TRIM41 | 90933 | 226445_s_at | 0.0473 | 0.8307 | |
| GSE45670 | TRIM41 | 90933 | 226445_s_at | 0.1653 | 0.2656 | |
| GSE53622 | TRIM41 | 90933 | 39751 | -0.0822 | 0.0372 | |
| GSE53624 | TRIM41 | 90933 | 39751 | -0.0457 | 0.5781 | |
| GSE63941 | TRIM41 | 90933 | 226445_s_at | 0.8492 | 0.0334 | |
| GSE77861 | TRIM41 | 90933 | 226445_s_at | -0.1851 | 0.1977 | |
| GSE97050 | TRIM41 | 90933 | A_33_P3354434 | 0.2465 | 0.2500 | |
| SRP007169 | TRIM41 | 90933 | RNAseq | 0.8744 | 0.1202 | |
| SRP064894 | TRIM41 | 90933 | RNAseq | 0.1309 | 0.2776 | |
| SRP133303 | TRIM41 | 90933 | RNAseq | -0.0741 | 0.6887 | |
| SRP159526 | TRIM41 | 90933 | RNAseq | -0.1886 | 0.4591 | |
| SRP193095 | TRIM41 | 90933 | RNAseq | -0.0627 | 0.6535 | |
| SRP219564 | TRIM41 | 90933 | RNAseq | -0.0794 | 0.7663 | |
| TCGA | TRIM41 | 90933 | RNAseq | -0.0587 | 0.2743 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by TRIM41 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TRIM41:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TRIM41 | 90933 | 2 | 13 | 15 | |
| GSE20123 | TRIM41 | 90933 | 2 | 13 | 15 | |
| GSE43470 | TRIM41 | 90933 | 1 | 10 | 32 | |
| GSE46452 | TRIM41 | 90933 | 0 | 27 | 32 | |
| GSE47630 | TRIM41 | 90933 | 2 | 20 | 18 | |
| GSE54993 | TRIM41 | 90933 | 10 | 2 | 58 | |
| GSE54994 | TRIM41 | 90933 | 3 | 19 | 31 | |
| GSE60625 | TRIM41 | 90933 | 1 | 0 | 10 | |
| GSE74703 | TRIM41 | 90933 | 1 | 6 | 29 | |
| GSE74704 | TRIM41 | 90933 | 1 | 6 | 13 | |
| TCGA | TRIM41 | 90933 | 12 | 33 | 51 |
Total number of gains: 35; Total number of losses: 149; Total Number of normals: 304.
Somatic mutations of TRIM41:
Generating mutation plots.
Highly correlated genes for TRIM41:
Showing top 20/139 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TRIM41 | AKR7A3 | 0.793402 | 3 | 0 | 3 |
| TRIM41 | PAOX | 0.753537 | 3 | 0 | 3 |
| TRIM41 | ABAT | 0.746273 | 3 | 0 | 3 |
| TRIM41 | B3GNT8 | 0.742293 | 3 | 0 | 3 |
| TRIM41 | MAP3K4 | 0.726085 | 3 | 0 | 3 |
| TRIM41 | CDC34 | 0.722801 | 3 | 0 | 3 |
| TRIM41 | TNNI2 | 0.715598 | 3 | 0 | 3 |
| TRIM41 | PTPRN | 0.703488 | 3 | 0 | 3 |
| TRIM41 | LRRC46 | 0.702097 | 3 | 0 | 3 |
| TRIM41 | ISLR2 | 0.69945 | 3 | 0 | 3 |
| TRIM41 | TEX13A | 0.693802 | 3 | 0 | 3 |
| TRIM41 | RIPK4 | 0.68609 | 4 | 0 | 3 |
| TRIM41 | DNAL4 | 0.685738 | 3 | 0 | 3 |
| TRIM41 | HES5 | 0.684644 | 3 | 0 | 3 |
| TRIM41 | DDC | 0.683641 | 3 | 0 | 3 |
| TRIM41 | ABHD11 | 0.681978 | 3 | 0 | 3 |
| TRIM41 | BCAP31 | 0.681299 | 3 | 0 | 3 |
| TRIM41 | HES2 | 0.673928 | 4 | 0 | 3 |
| TRIM41 | ZSWIM3 | 0.673263 | 4 | 0 | 3 |
| TRIM41 | ZIC1 | 0.673239 | 3 | 0 | 3 |
For details and further investigation, click here
