TRIM65

 

Full name: tripartite motif containing 65 Alias Symbol: 
Type: protein-coding gene Cytoband: 17q25.1
Entrez ID: 201292 HGNC ID: HGNC:27316 Ensembl Gene: ENSG00000141569 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of TRIM65:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 TRIM65 201292 235081_x_at -0.0461 0.8819
GSE26886 TRIM65 201292 235081_x_at 0.0014 0.9877
GSE45670 TRIM65 201292 235081_x_at 0.1388 0.0793
GSE53622 TRIM65 201292 109698 0.4415 0.0000
GSE53624 TRIM65 201292 109698 0.6401 0.0000
GSE63941 TRIM65 201292 235081_x_at 0.7443 0.0002
GSE77861 TRIM65 201292 235081_x_at 0.0335 0.8666
GSE97050 TRIM65 201292 A_33_P3331346 0.3350 0.2124
SRP007169 TRIM65 201292 RNAseq 0.9406 0.0295
SRP008496 TRIM65 201292 RNAseq 0.9729 0.0012
SRP064894 TRIM65 201292 RNAseq 0.6234 0.0000
SRP133303 TRIM65 201292 RNAseq 0.5335 0.0034
SRP159526 TRIM65 201292 RNAseq 0.4502 0.0335
SRP193095 TRIM65 201292 RNAseq 0.3509 0.0002
SRP219564 TRIM65 201292 RNAseq -0.0326 0.9026
TCGA TRIM65 201292 RNAseq 0.2194 0.0002

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by TRIM65 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of TRIM65:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 TRIM65 201292 7 2 21
GSE20123 TRIM65 201292 7 2 21
GSE43470 TRIM65 201292 5 3 35
GSE46452 TRIM65 201292 34 0 25
GSE47630 TRIM65 201292 8 1 31
GSE54993 TRIM65 201292 2 5 63
GSE54994 TRIM65 201292 10 4 39
GSE60625 TRIM65 201292 6 0 5
GSE74703 TRIM65 201292 5 1 30
GSE74704 TRIM65 201292 5 1 14
TCGA TRIM65 201292 31 10 55

Total number of gains: 120; Total number of losses: 29; Total Number of normals: 339.  


 

Somatic mutations of TRIM65:

 

Generating mutation plots.

 

Highly correlated genes for TRIM65:

 

Showing top 20/331 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
TRIM65EFTUD20.733883404
TRIM65ZNF2070.732774303
TRIM65CBLC0.721317303
TRIM65CCDC650.718001303
TRIM65METTL230.71547303
TRIM65DDX39A0.708234404
TRIM65SLC16A50.706414303
TRIM65PLXNA10.702859303
TRIM65NCAPD20.698043404
TRIM65UBE2D20.694662303
TRIM65PTCD10.694616303
TRIM65MTHFD1L0.691257303
TRIM65GPR1320.689456303
TRIM65ZNF7070.685008303
TRIM65MTHFD10.684651404
TRIM65ZDHHC160.683887303
TRIM65TMEM1380.68308303
TRIM65ATAD20.682742404
TRIM65CENPJ0.682319303
TRIM65POLE30.681745504

For details and further investigation, click here