DDX39A

 

Full name: DExD-box helicase 39A Alias Symbol: DDXL|BAT1L|URH49
Type: protein-coding gene Cytoband: 19p13.12
Entrez ID: 10212 HGNC ID: HGNC:17821 Ensembl Gene: ENSG00000123136 OMIM ID: 
Screen Evidence:

 

Expression of DDX39A:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 DDX39A 10212 201584_s_at 0.6796 0.0422
GSE20347 DDX39A 10212 201584_s_at 1.0386 0.0000
GSE23400 DDX39A 10212 201584_s_at 1.0889 0.0000
GSE26886 DDX39A 10212 201584_s_at 0.8091 0.0007
GSE29001 DDX39A 10212 201584_s_at 0.9384 0.0437
GSE38129 DDX39A 10212 201584_s_at 1.2364 0.0000
GSE45670 DDX39A 10212 201584_s_at 0.9684 0.0001
GSE53622 DDX39A 10212 9185 0.9364 0.0000
GSE53624 DDX39A 10212 9185 1.2249 0.0000
GSE63941 DDX39A 10212 201584_s_at 1.5850 0.0030
GSE77861 DDX39A 10212 201584_s_at 1.2132 0.0005
GSE97050 DDX39A 10212 A_23_P78664 0.9855 0.1264
SRP007169 DDX39A 10212 RNAseq 1.9420 0.0001
SRP008496 DDX39A 10212 RNAseq 1.6480 0.0000
SRP064894 DDX39A 10212 RNAseq 1.3401 0.0000
SRP133303 DDX39A 10212 RNAseq 0.8164 0.0014
SRP159526 DDX39A 10212 RNAseq 0.7629 0.0359
SRP193095 DDX39A 10212 RNAseq 0.7546 0.0000
SRP219564 DDX39A 10212 RNAseq 1.4594 0.0081

Upregulated datasets: 10; Downregulated datasets: 0.  

 

Survival by DDX39A expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  

Copy number change of DDX39A:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 DDX39A 10212 4 2 24
GSE20123 DDX39A 10212 3 1 26
GSE43470 DDX39A 10212 2 6 35
GSE46452 DDX39A 10212 47 1 11
GSE47630 DDX39A 10212 4 7 29
GSE54993 DDX39A 10212 15 4 51
GSE54994 DDX39A 10212 6 13 34
GSE60625 DDX39A 10212 9 0 2
GSE74703 DDX39A 10212 2 4 30
GSE74704 DDX39A 10212 0 1 19
TCGA DDX39A 10212 19 11 66

Total number of gains: 111; Total number of losses: 50; Total Number of normals: 327.  

 

Somatic mutations of DDX39A:

 

Generating mutation plots.

 

Highly correlated genes for DDX39A:

 

Showing top 20/2222 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
DDX39ADKC10.811564303
DDX39AUBE2C0.80952611011
DDX39AFAM89A0.801673303
DDX39ACAD0.79912312012
DDX39ALMNB20.795911011
DDX39AUBE2T0.790208808
DDX39AKPNA20.788071808
DDX39AUCK20.786666303
DDX39ACDCA30.78573710010
DDX39ACEP550.78542611011
DDX39ANCAPG20.78505610010
DDX39ADNMT10.78478212012
DDX39AUHRF10.783672606
DDX39ACDC200.78200310010
DDX39ATROAP0.7800210010
DDX39AEBNA1BP20.778896303
DDX39ARNASEH2A0.77678912012
DDX39ACKS1B0.77524212012
DDX39AHJURP0.77512311010
DDX39AMCM20.77348810010

For details and further investigation, click here