| Full name: tripartite motif containing 7 | Alias Symbol: RNF90|GNIP | ||
| Type: protein-coding gene | Cytoband: 5q35.3 | ||
| Entrez ID: 81786 | HGNC ID: HGNC:16278 | Ensembl Gene: ENSG00000146054 | OMIM ID: 609315 |
| Drug and gene relationship at DGIdb | |||
Expression of TRIM7:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | TRIM7 | 81786 | 223694_at | -0.8625 | 0.2982 | |
| GSE26886 | TRIM7 | 81786 | 223694_at | -0.7919 | 0.0105 | |
| GSE45670 | TRIM7 | 81786 | 223694_at | -0.1202 | 0.6555 | |
| GSE53622 | TRIM7 | 81786 | 37463 | -0.9528 | 0.0000 | |
| GSE53624 | TRIM7 | 81786 | 37463 | -1.2441 | 0.0000 | |
| GSE63941 | TRIM7 | 81786 | 223694_at | 2.0233 | 0.0039 | |
| GSE77861 | TRIM7 | 81786 | 223694_at | -0.0208 | 0.9563 | |
| GSE97050 | TRIM7 | 81786 | A_24_P277615 | -0.6014 | 0.1181 | |
| SRP007169 | TRIM7 | 81786 | RNAseq | -1.0459 | 0.1017 | |
| SRP008496 | TRIM7 | 81786 | RNAseq | -1.2962 | 0.0814 | |
| SRP064894 | TRIM7 | 81786 | RNAseq | -1.2040 | 0.0002 | |
| SRP133303 | TRIM7 | 81786 | RNAseq | -1.0324 | 0.0003 | |
| SRP159526 | TRIM7 | 81786 | RNAseq | -0.9280 | 0.2558 | |
| SRP193095 | TRIM7 | 81786 | RNAseq | -0.7579 | 0.0045 | |
| SRP219564 | TRIM7 | 81786 | RNAseq | -1.7990 | 0.0012 | |
| TCGA | TRIM7 | 81786 | RNAseq | 0.6065 | 0.0006 |
Upregulated datasets: 1; Downregulated datasets: 4.
Survival by TRIM7 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of TRIM7:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | TRIM7 | 81786 | 2 | 13 | 15 | |
| GSE20123 | TRIM7 | 81786 | 2 | 13 | 15 | |
| GSE43470 | TRIM7 | 81786 | 1 | 10 | 32 | |
| GSE46452 | TRIM7 | 81786 | 0 | 27 | 32 | |
| GSE47630 | TRIM7 | 81786 | 2 | 20 | 18 | |
| GSE54993 | TRIM7 | 81786 | 10 | 2 | 58 | |
| GSE54994 | TRIM7 | 81786 | 3 | 19 | 31 | |
| GSE60625 | TRIM7 | 81786 | 1 | 0 | 10 | |
| GSE74703 | TRIM7 | 81786 | 1 | 6 | 29 | |
| GSE74704 | TRIM7 | 81786 | 1 | 6 | 13 | |
| TCGA | TRIM7 | 81786 | 12 | 33 | 51 |
Total number of gains: 35; Total number of losses: 149; Total Number of normals: 304.
Somatic mutations of TRIM7:
Generating mutation plots.
Highly correlated genes for TRIM7:
Showing top 20/822 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| TRIM7 | RETSAT | 0.783869 | 3 | 0 | 3 |
| TRIM7 | CCNYL1 | 0.742007 | 3 | 0 | 3 |
| TRIM7 | EPGN | 0.719535 | 3 | 0 | 3 |
| TRIM7 | NUAK2 | 0.707271 | 3 | 0 | 3 |
| TRIM7 | KIAA1522 | 0.701715 | 3 | 0 | 3 |
| TRIM7 | LGALS3 | 0.701161 | 3 | 0 | 3 |
| TRIM7 | ZBTB8OS | 0.701013 | 3 | 0 | 3 |
| TRIM7 | CKMT1A | 0.697012 | 3 | 0 | 3 |
| TRIM7 | USP43 | 0.694562 | 5 | 0 | 5 |
| TRIM7 | DSG1 | 0.692599 | 3 | 0 | 3 |
| TRIM7 | RNF141 | 0.689193 | 4 | 0 | 4 |
| TRIM7 | PGLYRP3 | 0.687458 | 3 | 0 | 3 |
| TRIM7 | RTCA | 0.686468 | 3 | 0 | 3 |
| TRIM7 | RNF144B | 0.686161 | 3 | 0 | 3 |
| TRIM7 | FAM110C | 0.684399 | 6 | 0 | 6 |
| TRIM7 | C19orf33 | 0.681754 | 6 | 0 | 5 |
| TRIM7 | BNIPL | 0.679561 | 5 | 0 | 5 |
| TRIM7 | SGPP2 | 0.675389 | 6 | 0 | 5 |
| TRIM7 | THAP2 | 0.675268 | 3 | 0 | 3 |
| TRIM7 | WDR47 | 0.671691 | 3 | 0 | 3 |
For details and further investigation, click here
