| Full name: ribosomal RNA adenine dimethylase domain containing 1 | Alias Symbol: CGI-41|METTL25B | ||
| Type: protein-coding gene | Cytoband: 1q23.1 | ||
| Entrez ID: 51093 | HGNC ID: HGNC:24273 | Ensembl Gene: ENSG00000143303 | OMIM ID: |
Expression of RRNAD1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RRNAD1 | 51093 | 218914_at | -0.0578 | 0.9009 | |
| GSE20347 | RRNAD1 | 51093 | 218914_at | -0.0368 | 0.7805 | |
| GSE23400 | RRNAD1 | 51093 | 218914_at | 0.0623 | 0.1073 | |
| GSE26886 | RRNAD1 | 51093 | 218914_at | 0.3463 | 0.0268 | |
| GSE29001 | RRNAD1 | 51093 | 218914_at | 0.0811 | 0.6759 | |
| GSE38129 | RRNAD1 | 51093 | 218914_at | 0.0342 | 0.7811 | |
| GSE45670 | RRNAD1 | 51093 | 218914_at | 0.0443 | 0.7478 | |
| GSE53622 | RRNAD1 | 51093 | 165023 | -0.1450 | 0.0414 | |
| GSE53624 | RRNAD1 | 51093 | 165023 | -0.0060 | 0.9088 | |
| GSE63941 | RRNAD1 | 51093 | 218914_at | 1.1646 | 0.0078 | |
| GSE77861 | RRNAD1 | 51093 | 218914_at | 0.1259 | 0.5039 | |
| GSE97050 | RRNAD1 | 51093 | A_33_P3345354 | 0.0886 | 0.6751 | |
| SRP007169 | RRNAD1 | 51093 | RNAseq | -0.8167 | 0.0468 | |
| SRP008496 | RRNAD1 | 51093 | RNAseq | -0.5664 | 0.0568 | |
| SRP064894 | RRNAD1 | 51093 | RNAseq | 0.1874 | 0.2518 | |
| SRP133303 | RRNAD1 | 51093 | RNAseq | -0.2752 | 0.2022 | |
| SRP159526 | RRNAD1 | 51093 | RNAseq | -0.0586 | 0.8346 | |
| SRP193095 | RRNAD1 | 51093 | RNAseq | 0.0367 | 0.6674 | |
| SRP219564 | RRNAD1 | 51093 | RNAseq | 0.1406 | 0.7045 |
Upregulated datasets: 1; Downregulated datasets: 0.
Survival by RRNAD1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of RRNAD1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RRNAD1 | 51093 | 12 | 0 | 18 | |
| GSE20123 | RRNAD1 | 51093 | 12 | 0 | 18 | |
| GSE43470 | RRNAD1 | 51093 | 7 | 2 | 34 | |
| GSE46452 | RRNAD1 | 51093 | 2 | 1 | 56 | |
| GSE47630 | RRNAD1 | 51093 | 14 | 0 | 26 | |
| GSE54993 | RRNAD1 | 51093 | 0 | 5 | 65 | |
| GSE54994 | RRNAD1 | 51093 | 16 | 0 | 37 | |
| GSE60625 | RRNAD1 | 51093 | 0 | 0 | 11 | |
| GSE74703 | RRNAD1 | 51093 | 7 | 2 | 27 | |
| GSE74704 | RRNAD1 | 51093 | 6 | 0 | 14 | |
| TCGA | RRNAD1 | 51093 | 38 | 2 | 56 |
Total number of gains: 114; Total number of losses: 12; Total Number of normals: 362.
Somatic mutations of RRNAD1:
Generating mutation plots.
Highly correlated genes for RRNAD1:
Showing top 20/201 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RRNAD1 | GATC | 0.774557 | 3 | 0 | 3 |
| RRNAD1 | CLIP2 | 0.773655 | 3 | 0 | 3 |
| RRNAD1 | TERF2 | 0.768378 | 3 | 0 | 3 |
| RRNAD1 | C12orf65 | 0.755973 | 3 | 0 | 3 |
| RRNAD1 | GPS2 | 0.752097 | 3 | 0 | 3 |
| RRNAD1 | PDE6D | 0.750911 | 3 | 0 | 3 |
| RRNAD1 | PTPRU | 0.748767 | 3 | 0 | 3 |
| RRNAD1 | IRF2BP1 | 0.746603 | 3 | 0 | 3 |
| RRNAD1 | KCTD1 | 0.746442 | 3 | 0 | 3 |
| RRNAD1 | MEF2D | 0.743862 | 3 | 0 | 3 |
| RRNAD1 | TMED4 | 0.741202 | 3 | 0 | 3 |
| RRNAD1 | COPE | 0.736771 | 3 | 0 | 3 |
| RRNAD1 | TNFSF13 | 0.735663 | 3 | 0 | 3 |
| RRNAD1 | TUBGCP4 | 0.73033 | 3 | 0 | 3 |
| RRNAD1 | CRTC2 | 0.729303 | 3 | 0 | 3 |
| RRNAD1 | HERPUD2 | 0.722 | 3 | 0 | 3 |
| RRNAD1 | MED26 | 0.720821 | 3 | 0 | 3 |
| RRNAD1 | IMPDH1 | 0.719284 | 3 | 0 | 3 |
| RRNAD1 | SORBS3 | 0.715243 | 3 | 0 | 3 |
| RRNAD1 | NTN4 | 0.715159 | 3 | 0 | 3 |
For details and further investigation, click here
