VAV3

 

Full name: vav guanine nucleotide exchange factor 3 Alias Symbol: 
Type: protein-coding gene Cytoband: 1p13.3
Entrez ID: 10451 HGNC ID: HGNC:12659 Ensembl Gene: ENSG00000134215 OMIM ID: 605541
Drug and gene relationship at DGIdb

 

VAV3 involved pathways:

KEGG pathway Description View
hsa04024cAMP signaling pathway
hsa04062Chemokine signaling pathway
hsa04510Focal adhesion
hsa04650Natural killer cell mediated cytotoxicity
hsa04660T cell receptor signaling pathway
hsa04662B cell receptor signaling pathway
hsa04664Fc epsilon RI signaling pathway
hsa04666Fc gamma R-mediated phagocytosis
hsa04670Leukocyte transendothelial migration
hsa04810Regulation of actin cytoskeleton

 

Expression of VAV3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 VAV3 10451 218807_at -1.2415 0.0700
GSE20347 VAV3 10451 218807_at -2.1848 0.0000
GSE23400 VAV3 10451 218807_at -1.2241 0.0000
GSE26886 VAV3 10451 218807_at -2.3166 0.0006
GSE29001 VAV3 10451 218807_at -1.3175 0.0034
GSE38129 VAV3 10451 218807_at -1.6302 0.0022
GSE45670 VAV3 10451 218807_at -0.6705 0.1175
GSE63941 VAV3 10451 218807_at 3.9307 0.0072
GSE77861 VAV3 10451 218807_at -2.0798 0.0002
GSE97050 VAV3 10451 A_23_P201551 -0.1798 0.7602
SRP007169 VAV3 10451 RNAseq -4.1187 0.0000
SRP008496 VAV3 10451 RNAseq -3.3663 0.0000
SRP064894 VAV3 10451 RNAseq -1.8571 0.0000
SRP133303 VAV3 10451 RNAseq -1.4951 0.0000
SRP159526 VAV3 10451 RNAseq -3.3127 0.0000
SRP193095 VAV3 10451 RNAseq -1.7531 0.0000
SRP219564 VAV3 10451 RNAseq -1.4246 0.1053
TCGA VAV3 10451 RNAseq -0.0383 0.8020

Upregulated datasets: 1; Downregulated datasets: 12.  


 

Survival by VAV3 expression:

 

TCGA

 

Note: Click image to view full size file.  


Copy number change of VAV3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 VAV3 10451 0 11 19
GSE20123 VAV3 10451 0 11 19
GSE43470 VAV3 10451 0 7 36
GSE46452 VAV3 10451 2 2 55
GSE47630 VAV3 10451 9 5 26
GSE54993 VAV3 10451 0 1 69
GSE54994 VAV3 10451 7 4 42
GSE60625 VAV3 10451 0 0 11
GSE74703 VAV3 10451 0 6 30
GSE74704 VAV3 10451 0 7 13
TCGA VAV3 10451 8 26 62

Total number of gains: 26; Total number of losses: 80; Total Number of normals: 382.  


 

Somatic mutations of VAV3:

 

Generating mutation plots.

 

Highly correlated genes for VAV3:

 

Showing top 20/1343 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
VAV3RASSF50.828113505
VAV3ATP13A40.819892404
VAV3EPS8L20.790782808
VAV3S100A160.781208505
VAV3VPS13D0.768526808
VAV3SFTA20.763199404
VAV3FAM3D0.762818505
VAV3RAET1E0.761835404
VAV3KLF80.759296909
VAV3SYTL10.755566606
VAV3CLIC30.752833909
VAV3GRN0.749754808
VAV3SUMF10.74801303
VAV3CST110.746916303
VAV3CYP3A50.745543808
VAV3SERPINB10.744634909
VAV3DUOX10.74325110010
VAV3CYP2J20.742375909
VAV3BNIPL0.740007505
VAV3PLEKHA70.73986606

For details and further investigation, click here