Full name: vimentin	Alias Symbol:
Type: protein-coding gene	Cytoband: 10p13
Entrez ID: 7431	HGNC ID: HGNC:12692	Ensembl Gene: ENSG00000026025	OMIM ID: 193060
Drug and gene relationship at DGIdb

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Expression of VIM:

 

Dataset	Gene	EntrezID	Probe	Log2FC	Adj.pValue	Expression
GSE17351	VIM	7431	201426_s_at	-0.3753	0.7211	Show
GSE20347	VIM	7431	201426_s_at	0.7564	0.0289	Show
GSE23400	VIM	7431	201426_s_at	0.2884	0.1118	Show
GSE26886	VIM	7431	201426_s_at	1.3189	0.0019	Show
GSE29001	VIM	7431	201426_s_at	0.7619	0.2171	Show
GSE38129	VIM	7431	201426_s_at	0.3032	0.5673	Show
GSE45670	VIM	7431	201426_s_at	-1.4511	0.0040	Show
GSE53622	VIM	7431	45368	0.4248	0.0002	Show
GSE53624	VIM	7431	45368	0.4845	0.0000	Show
GSE63941	VIM	7431	201426_s_at	-6.0186	0.0037	Show
GSE77861	VIM	7431	201426_s_at	1.3756	0.0761	Show
GSE97050	VIM	7431	A_23_P161190	0.6483	0.1880	Show
SRP007169	VIM	7431	RNAseq	2.2603	0.0001	Show
SRP008496	VIM	7431	RNAseq	2.1075	0.0000	Show
SRP064894	VIM	7431	RNAseq	0.6213	0.0676	Show
SRP133303	VIM	7431	RNAseq	0.0582	0.8476	Show
SRP159526	VIM	7431	RNAseq	0.1181	0.7001	Show
SRP193095	VIM	7431	RNAseq	1.4526	0.0000	Show
SRP219564	VIM	7431	RNAseq	0.3672	0.5229	Show
TCGA	VIM	7431	RNAseq	-0.0789	0.2729	Show

Upregulated datasets: 4; Downregulated datasets: 2.  Download Data

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Survival by VIM expression:

 

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Copy number change of VIM:

 

Dataset	Gene	EntrezID	Gain	Loss	Normal	Detail
GSE15526	VIM	7431	3	8	19	Show
GSE20123	VIM	7431	3	7	20	Show
GSE43470	VIM	7431	3	4	36	Show
GSE46452	VIM	7431	1	14	44	Show
GSE47630	VIM	7431	5	15	20	Show
GSE54993	VIM	7431	10	0	60	Show
GSE54994	VIM	7431	4	9	40	Show
GSE60625	VIM	7431	0	0	11	Show
GSE74703	VIM	7431	2	3	31	Show
GSE74704	VIM	7431	0	6	14	Show
TCGA	VIM	7431	19	26	51	Show

Total number of gains: 50; Total number of losses: 92; Total Number of normals: 346.  Download Data

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Somatic mutations of VIM:

 

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Highly correlated genes for VIM:

 

Showing top 20/854 corelated genes with mean PCC>0.5.

Gene1	Gene2	Mean PCC	Num. Datasets	Num. PCC<0	Num. PCC>0.5
VIM	FN1	0.768854	12	0	12
VIM	DNM3OS	0.764312	3	0	3
VIM	FBN1	0.760239	11	0	10
VIM	PMP22	0.740942	12	0	10
VIM	FSTL1	0.732086	13	0	13
VIM	MCAM	0.723953	8	0	8
VIM	GNG2	0.723586	4	0	3
VIM	BICC1	0.720019	9	0	9
VIM	TTC28	0.719801	4	0	4
VIM	IGFBP7	0.712012	13	0	11
VIM	CXCL5	0.709307	3	0	3
VIM	COL12A1	0.7061	9	0	9
VIM	COL6A2	0.703556	12	0	11
VIM	CALD1	0.701487	12	0	11
VIM	AEBP1	0.70117	13	0	11
VIM	COL6A1	0.700955	12	0	11
VIM	LAMA4	0.697482	12	0	11
VIM	EMP3	0.69605	12	0	12
VIM	NID2	0.696043	10	0	10
VIM	C8orf88	0.695082	3	0	3

For details and further investigation, click here