WNT1

 

Full name: Wnt family member 1 Alias Symbol: 
Type: protein-coding gene Cytoband: 12q13.12
Entrez ID: 7471 HGNC ID: HGNC:12774 Ensembl Gene: ENSG00000125084 OMIM ID: 164820
Drug and gene relationship at DGIdb

 

WNT1 involved pathways:

KEGG pathway Description View
hsa04150mTOR signaling pathway
hsa04310Wnt signaling pathway
hsa04390Hippo signaling pathway
hsa04550Signaling pathways regulating pluripotency of stem cells
hsa04916Melanogenesis
hsa05166HTLV-I infection
hsa05200Pathways in cancer
hsa05205Proteoglycans in cancer
hsa05217Basal cell carcinoma

 

Expression of WNT1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 WNT1 7471 208570_at 0.2161 0.4359
GSE20347 WNT1 7471 208570_at -0.0495 0.5044
GSE23400 WNT1 7471 208570_at -0.0884 0.0247
GSE26886 WNT1 7471 208570_at 0.3172 0.0128
GSE29001 WNT1 7471 208570_at -0.0155 0.9194
GSE38129 WNT1 7471 208570_at -0.0563 0.2910
GSE45670 WNT1 7471 208570_at 0.0924 0.3326
GSE53622 WNT1 7471 12679 0.1337 0.0796
GSE53624 WNT1 7471 12679 0.2684 0.0001
GSE63941 WNT1 7471 208570_at 0.3405 0.0106
GSE77861 WNT1 7471 208570_at 0.0441 0.6093
GSE97050 WNT1 7471 A_33_P3382588 0.1012 0.6127
TCGA WNT1 7471 RNAseq 0.6701 0.3557

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by WNT1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of WNT1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 WNT1 7471 6 1 23
GSE20123 WNT1 7471 6 1 23
GSE43470 WNT1 7471 4 1 38
GSE46452 WNT1 7471 8 1 50
GSE47630 WNT1 7471 11 2 27
GSE54993 WNT1 7471 0 5 65
GSE54994 WNT1 7471 4 1 48
GSE60625 WNT1 7471 0 0 11
GSE74703 WNT1 7471 4 1 31
GSE74704 WNT1 7471 4 1 15
TCGA WNT1 7471 16 15 65

Total number of gains: 63; Total number of losses: 29; Total Number of normals: 396.  


 

Somatic mutations of WNT1:

 

Generating mutation plots.

 

Highly correlated genes for WNT1:

 

Showing top 20/255 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
WNT1CECR20.736897303
WNT1SNORA71A0.736068303
WNT1SPTA10.717815303
WNT1BRSK10.693008303
WNT1ADH60.685568303
WNT1LIN28B0.685451303
WNT1OPTC0.685269303
WNT1BMP100.682693303
WNT1ADRA1A0.680037303
WNT1TREM10.679143303
WNT1OR2H20.676776303
WNT1LIM20.675607505
WNT1APBA20.670517303
WNT1ZNF6970.668076403
WNT1CHGB0.665043303
WNT1SLC6A180.653354303
WNT1METTL7B0.652826303
WNT1TCTE10.652815404
WNT1KCNK90.651345303
WNT1TNN0.64943403

For details and further investigation, click here