CDC6

 

Full name: cell division cycle 6 Alias Symbol: 
Type: protein-coding gene Cytoband: 17q21.2
Entrez ID: 990 HGNC ID: HGNC:1744 Ensembl Gene: ENSG00000094804 OMIM ID: 602627
Drug and gene relationship at DGIdb
Screen Evidence:
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

CDC6 involved pathways:

KEGG pathway Description View
hsa04110Cell cycle

 

Expression of CDC6:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CDC6 990 203967_at 1.9426 0.0690
GSE20347 CDC6 990 203967_at 1.8554 0.0000
GSE23400 CDC6 990 203967_at 1.0210 0.0000
GSE26886 CDC6 990 203968_s_at 1.0376 0.0028
GSE29001 CDC6 990 203967_at 1.3571 0.0008
GSE38129 CDC6 990 203968_s_at 1.8896 0.0000
GSE45670 CDC6 990 203968_s_at 1.8602 0.0000
GSE53622 CDC6 990 15584 0.2693 0.0002
GSE53624 CDC6 990 15584 0.3061 0.0023
GSE63941 CDC6 990 203968_s_at 3.1388 0.0003
GSE77861 CDC6 990 203968_s_at 1.0508 0.0025
GSE97050 CDC6 990 A_33_P3218450 0.0621 0.8292
SRP007169 CDC6 990 RNAseq 3.6409 0.0000
SRP008496 CDC6 990 RNAseq 2.7430 0.0000
SRP064894 CDC6 990 RNAseq 1.8170 0.0000
SRP133303 CDC6 990 RNAseq 1.9705 0.0000
SRP159526 CDC6 990 RNAseq 1.9564 0.0000
SRP193095 CDC6 990 RNAseq 1.3525 0.0000
SRP219564 CDC6 990 RNAseq 2.3543 0.0007
TCGA CDC6 990 RNAseq 1.2194 0.0000

Upregulated datasets: 16; Downregulated datasets: 0.  


 

Survival by CDC6 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CDC6:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CDC6 990 8 1 21
GSE20123 CDC6 990 8 1 21
GSE43470 CDC6 990 1 2 40
GSE46452 CDC6 990 34 0 25
GSE47630 CDC6 990 8 1 31
GSE54993 CDC6 990 3 4 63
GSE54994 CDC6 990 8 5 40
GSE60625 CDC6 990 4 0 7
GSE74703 CDC6 990 1 1 34
GSE74704 CDC6 990 5 1 14
TCGA CDC6 990 22 8 66

Total number of gains: 102; Total number of losses: 24; Total Number of normals: 362.  


 

Somatic mutations of CDC6:

 

Generating mutation plots.

 

Highly correlated genes for CDC6:

 

Showing top 20/580 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CDC6CDCA50.883996606
CDC6RAD510.85035710010
CDC6KIF4A0.84975910010
CDC6FEN10.84314710010
CDC6RAD51AP10.832457909
CDC6TRIP130.829184909
CDC6AURKB0.828514909
CDC6UHRF10.826255505
CDC6GINS20.82621910010
CDC6CDC200.82175310010
CDC6MTFR20.818842505
CDC6CKS1B0.817717909
CDC6RFC40.814688909
CDC6CDC450.814603909
CDC6PNPT10.813868303
CDC6BUB1B0.81224110010
CDC6CDK10.805976909
CDC6EXO10.80401810010
CDC6KIF2C0.801261909
CDC6STIL0.798277909

For details and further investigation, click here