ZC3H12A

 

Full name: zinc finger CCCH-type containing 12A Alias Symbol: FLJ23231|MCPIP1
Type: protein-coding gene Cytoband: 1p34.3
Entrez ID: 80149 HGNC ID: HGNC:26259 Ensembl Gene: ENSG00000163874 OMIM ID: 610562
Screen Evidence:
  • This gene has been idenfitied as a common driver in this paper.
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of ZC3H12A:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE53622 ZC3H12A 80149 133305 0.8585 0.0000
GSE53624 ZC3H12A 80149 133305 0.8022 0.0000
GSE97050 ZC3H12A 80149 A_33_P3214720 1.0523 0.1506
SRP007169 ZC3H12A 80149 RNAseq -0.4407 0.3917
SRP008496 ZC3H12A 80149 RNAseq -0.5639 0.1721
SRP064894 ZC3H12A 80149 RNAseq 0.4766 0.1375
SRP133303 ZC3H12A 80149 RNAseq 0.8993 0.0052
SRP159526 ZC3H12A 80149 RNAseq 0.0894 0.8812
SRP193095 ZC3H12A 80149 RNAseq 1.1372 0.0000
SRP219564 ZC3H12A 80149 RNAseq 0.7465 0.2384
TCGA ZC3H12A 80149 RNAseq 0.4087 0.0002

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by ZC3H12A expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of ZC3H12A:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZC3H12A 80149 2 4 24
GSE20123 ZC3H12A 80149 2 3 25
GSE43470 ZC3H12A 80149 7 3 33
GSE46452 ZC3H12A 80149 4 1 54
GSE47630 ZC3H12A 80149 8 3 29
GSE54993 ZC3H12A 80149 1 1 68
GSE54994 ZC3H12A 80149 11 2 40
GSE60625 ZC3H12A 80149 0 0 11
GSE74703 ZC3H12A 80149 6 2 28
GSE74704 ZC3H12A 80149 1 0 19
TCGA ZC3H12A 80149 12 16 68

Total number of gains: 54; Total number of losses: 35; Total Number of normals: 399.  


 

Somatic mutations of ZC3H12A:

 

Generating mutation plots.

 

Highly correlated genes for ZC3H12A:

 

Showing all 18 correlated genes with mean PCC>0.5.

Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZC3H12AFOSL10.64592404
ZC3H12ACXCL10.64383403
ZC3H12ATNFAIP30.633026404
ZC3H12ACXCL20.628259403
ZC3H12ANDE10.624321303
ZC3H12ASOD20.623657403
ZC3H12AIL36G0.621739303
ZC3H12APHLDB20.603597303
ZC3H12AIL1B0.603348404
ZC3H12ACEBPB0.602428403
ZC3H12APLAUR0.591064403
ZC3H12AKIAA09300.583753303
ZC3H12APLAU0.574257403
ZC3H12ACDKN1A0.558592403
ZC3H12ARNF19B0.549477403
ZC3H12AS100A70.547446303
ZC3H12ABCAR10.543762403
ZC3H12ATNFRSF12A0.5375403

For details and further investigation, click here