ZMYM1

 

Full name: zinc finger MYM-type containing 1 Alias Symbol: FLJ23151|MYM
Type: protein-coding gene Cytoband: 1p34.3
Entrez ID: 79830 HGNC ID: HGNC:26253 Ensembl Gene: ENSG00000197056 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of ZMYM1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ZMYM1 79830 220206_at 0.3288 0.3039
GSE20347 ZMYM1 79830 220206_at 0.2141 0.2053
GSE23400 ZMYM1 79830 220206_at 0.2056 0.0037
GSE26886 ZMYM1 79830 220206_at -0.0514 0.8836
GSE29001 ZMYM1 79830 220206_at 0.1748 0.5515
GSE38129 ZMYM1 79830 220206_at 0.2175 0.0948
GSE45670 ZMYM1 79830 220206_at 0.3984 0.0119
GSE53622 ZMYM1 79830 78034 0.2444 0.0077
GSE53624 ZMYM1 79830 78034 0.2734 0.0020
GSE63941 ZMYM1 79830 220206_at 0.2820 0.6753
GSE77861 ZMYM1 79830 220206_at 0.0857 0.7739
GSE97050 ZMYM1 79830 A_23_P161091 0.2182 0.3482
SRP007169 ZMYM1 79830 RNAseq 0.3120 0.4957
SRP008496 ZMYM1 79830 RNAseq 0.1396 0.6009
SRP064894 ZMYM1 79830 RNAseq 0.2459 0.3769
SRP133303 ZMYM1 79830 RNAseq 0.4038 0.0152
SRP159526 ZMYM1 79830 RNAseq 0.1187 0.7190
SRP193095 ZMYM1 79830 RNAseq 0.0057 0.9604
SRP219564 ZMYM1 79830 RNAseq -0.3765 0.3117
TCGA ZMYM1 79830 RNAseq 0.1809 0.0029

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by ZMYM1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of ZMYM1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZMYM1 79830 2 5 23
GSE20123 ZMYM1 79830 2 4 24
GSE43470 ZMYM1 79830 6 2 35
GSE46452 ZMYM1 79830 4 1 54
GSE47630 ZMYM1 79830 8 3 29
GSE54993 ZMYM1 79830 1 1 68
GSE54994 ZMYM1 79830 11 3 39
GSE60625 ZMYM1 79830 0 0 11
GSE74703 ZMYM1 79830 5 1 30
GSE74704 ZMYM1 79830 1 0 19
TCGA ZMYM1 79830 13 18 65

Total number of gains: 53; Total number of losses: 38; Total Number of normals: 397.  

 

Somatic mutations of ZMYM1:

 

Generating mutation plots.

 

Highly correlated genes for ZMYM1:

 

Showing top 20/181 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZMYM1SLC39A80.749754303
ZMYM1TRIM350.674563303
ZMYM1FANCM0.664358403
ZMYM1ARL13B0.66038303
ZMYM1GK50.652285303
ZMYM1CKAP2L0.647368404
ZMYM1PTPRE0.643573303
ZMYM1VRK20.64315404
ZMYM1TTC30B0.639198303
ZMYM1TNIP30.63631403
ZMYM1ANKFY10.635762303
ZMYM1ERCC80.633346303
ZMYM1IFFO20.629339303
ZMYM1ISCA20.617201403
ZMYM1SASS60.615247504
ZMYM1NFE2L30.615141403
ZMYM1SLCO1B30.614732403
ZMYM1TANC20.613326504
ZMYM1FDXACB10.613129303
ZMYM1CLSPN0.609447605

For details and further investigation, click here