ZSCAN16-AS1

 

Full name: ZSCAN16 antisense RNA 1 Alias Symbol: 
Type: non-coding RNA Cytoband: 6p22.1
Entrez ID: 100129195 HGNC ID: HGNC:48982 Ensembl Gene: ENSG00000269293 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of ZSCAN16-AS1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 ZSCAN16-AS1 100129195 244730_x_at -0.1945 0.4623
GSE26886 ZSCAN16-AS1 100129195 244730_x_at 0.2822 0.0030
GSE45670 ZSCAN16-AS1 100129195 236777_at -0.0084 0.9623
GSE53622 ZSCAN16-AS1 100129195 150506 0.1497 0.1103
GSE53624 ZSCAN16-AS1 100129195 150506 0.2029 0.1432
GSE63941 ZSCAN16-AS1 100129195 244730_x_at -0.1405 0.5693
GSE77861 ZSCAN16-AS1 100129195 244730_x_at -0.0001 0.9995
SRP007169 ZSCAN16-AS1 100129195 RNAseq 0.5843 0.3849
SRP064894 ZSCAN16-AS1 100129195 RNAseq 0.3855 0.3489
SRP133303 ZSCAN16-AS1 100129195 RNAseq 0.1013 0.5997
SRP159526 ZSCAN16-AS1 100129195 RNAseq 0.3548 0.3365
SRP193095 ZSCAN16-AS1 100129195 RNAseq 0.2532 0.0610
SRP219564 ZSCAN16-AS1 100129195 RNAseq -0.4150 0.5878

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by ZSCAN16-AS1 expression:

 

GSE53622GSE53624

 

Note: Click image to view full size file.  


Copy number change of ZSCAN16-AS1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 ZSCAN16-AS1 100129195 3 2 25
GSE20123 ZSCAN16-AS1 100129195 3 2 25
GSE43470 ZSCAN16-AS1 100129195 5 0 38
GSE46452 ZSCAN16-AS1 100129195 1 10 48
GSE47630 ZSCAN16-AS1 100129195 7 4 29
GSE54993 ZSCAN16-AS1 100129195 2 1 67
GSE54994 ZSCAN16-AS1 100129195 11 4 38
GSE60625 ZSCAN16-AS1 100129195 0 1 10
GSE74703 ZSCAN16-AS1 100129195 5 0 31
GSE74704 ZSCAN16-AS1 100129195 0 1 19

Total number of gains: 37; Total number of losses: 25; Total Number of normals: 330.  


 

Somatic mutations of ZSCAN16-AS1:

 

Generating mutation plots.

 

Highly correlated genes for ZSCAN16-AS1:

 

Showing top 20/71 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
ZSCAN16-AS1MUC20.772628303
ZSCAN16-AS1CORO60.740887404
ZSCAN16-AS1ZNF5270.729087303
ZSCAN16-AS1INSC0.70244303
ZSCAN16-AS1PNPLA70.693212303
ZSCAN16-AS1MFGE80.684577303
ZSCAN16-AS1AK10.670795303
ZSCAN16-AS1SIM10.666437303
ZSCAN16-AS1RAX20.666279403
ZSCAN16-AS1KRT350.656543403
ZSCAN16-AS1CLDN90.64953303
ZSCAN16-AS1RSPH90.6493403
ZSCAN16-AS1ST8SIA10.648684303
ZSCAN16-AS1CIB30.643723404
ZSCAN16-AS1BRF10.63998303
ZSCAN16-AS1KRT740.638396303
ZSCAN16-AS1DCHS10.637072303
ZSCAN16-AS1LYZL10.634443303
ZSCAN16-AS1GNG80.629328404
ZSCAN16-AS1SEZ60.629243303

For details and further investigation, click here