| Full name: ATP binding cassette subfamily F member 3 | Alias Symbol: EST201864 | ||
| Type: protein-coding gene | Cytoband: 3q27.1 | ||
| Entrez ID: 55324 | HGNC ID: HGNC:72 | Ensembl Gene: ENSG00000161204 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of ABCF3:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | ABCF3 | 55324 | 202394_s_at | 0.5449 | 0.0671 | |
| GSE20347 | ABCF3 | 55324 | 202394_s_at | 0.3711 | 0.0003 | |
| GSE23400 | ABCF3 | 55324 | 202394_s_at | 0.2754 | 0.0000 | |
| GSE26886 | ABCF3 | 55324 | 202394_s_at | 0.1694 | 0.5236 | |
| GSE29001 | ABCF3 | 55324 | 202394_s_at | 0.3168 | 0.1846 | |
| GSE38129 | ABCF3 | 55324 | 202394_s_at | 0.5283 | 0.0000 | |
| GSE45670 | ABCF3 | 55324 | 202394_s_at | 0.6085 | 0.0002 | |
| GSE53622 | ABCF3 | 55324 | 40552 | 0.5608 | 0.0000 | |
| GSE53624 | ABCF3 | 55324 | 40552 | 0.5662 | 0.0000 | |
| GSE63941 | ABCF3 | 55324 | 202394_s_at | 0.5150 | 0.1746 | |
| GSE77861 | ABCF3 | 55324 | 202394_s_at | 0.3203 | 0.0482 | |
| GSE97050 | ABCF3 | 55324 | A_24_P251688 | 0.7039 | 0.1144 | |
| SRP007169 | ABCF3 | 55324 | RNAseq | 1.0868 | 0.0256 | |
| SRP008496 | ABCF3 | 55324 | RNAseq | 0.7795 | 0.0107 | |
| SRP064894 | ABCF3 | 55324 | RNAseq | 0.7768 | 0.0000 | |
| SRP133303 | ABCF3 | 55324 | RNAseq | 0.6586 | 0.0001 | |
| SRP159526 | ABCF3 | 55324 | RNAseq | 1.0588 | 0.0000 | |
| SRP193095 | ABCF3 | 55324 | RNAseq | 0.5708 | 0.0001 | |
| SRP219564 | ABCF3 | 55324 | RNAseq | 0.5908 | 0.1155 | |
| TCGA | ABCF3 | 55324 | RNAseq | 0.1401 | 0.0049 |
Upregulated datasets: 2; Downregulated datasets: 0.
Survival by ABCF3 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of ABCF3:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | ABCF3 | 55324 | 25 | 0 | 5 | |
| GSE20123 | ABCF3 | 55324 | 25 | 0 | 5 | |
| GSE43470 | ABCF3 | 55324 | 25 | 0 | 18 | |
| GSE46452 | ABCF3 | 55324 | 19 | 1 | 39 | |
| GSE47630 | ABCF3 | 55324 | 27 | 2 | 11 | |
| GSE54993 | ABCF3 | 55324 | 1 | 19 | 50 | |
| GSE54994 | ABCF3 | 55324 | 41 | 0 | 12 | |
| GSE60625 | ABCF3 | 55324 | 0 | 6 | 5 | |
| GSE74703 | ABCF3 | 55324 | 21 | 0 | 15 | |
| GSE74704 | ABCF3 | 55324 | 17 | 0 | 3 | |
| TCGA | ABCF3 | 55324 | 77 | 0 | 19 |
Total number of gains: 278; Total number of losses: 28; Total Number of normals: 182.
Somatic mutations of ABCF3:
Generating mutation plots.
Highly correlated genes for ABCF3:
Showing top 20/1530 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| ABCF3 | MRPL47 | 0.78357 | 7 | 0 | 7 |
| ABCF3 | ALG3 | 0.781055 | 13 | 0 | 12 |
| ABCF3 | XXYLT1 | 0.772794 | 5 | 0 | 5 |
| ABCF3 | TMEM44 | 0.75804 | 5 | 0 | 5 |
| ABCF3 | SLBP | 0.748484 | 5 | 0 | 5 |
| ABCF3 | PSMG3 | 0.747457 | 6 | 0 | 6 |
| ABCF3 | DNAJB11 | 0.746583 | 8 | 0 | 7 |
| ABCF3 | TIMMDC1 | 0.740938 | 3 | 0 | 3 |
| ABCF3 | EIF2B5 | 0.739394 | 12 | 0 | 11 |
| ABCF3 | NUP133 | 0.735823 | 4 | 0 | 4 |
| ABCF3 | XRN1 | 0.735391 | 3 | 0 | 3 |
| ABCF3 | NACC1 | 0.734139 | 4 | 0 | 3 |
| ABCF3 | PSMD2 | 0.73398 | 13 | 0 | 12 |
| ABCF3 | EIF4G1 | 0.728006 | 13 | 0 | 12 |
| ABCF3 | PDCD2L | 0.727315 | 4 | 0 | 4 |
| ABCF3 | MFSD3 | 0.721031 | 4 | 0 | 3 |
| ABCF3 | POLR2H | 0.71995 | 12 | 0 | 12 |
| ABCF3 | FBXO45 | 0.718613 | 4 | 0 | 4 |
| ABCF3 | HMCES | 0.718454 | 9 | 0 | 9 |
| ABCF3 | CCDC117 | 0.717687 | 3 | 0 | 3 |
For details and further investigation, click here
