| Full name: ARRDC3 antisense RNA 1 | Alias Symbol: | ||
| Type: non-coding RNA | Cytoband: 5q14.3 | ||
| Entrez ID: 100129716 | HGNC ID: HGNC:44145 | Ensembl Gene: ENSG00000281357 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of ARRDC3-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | ARRDC3-AS1 | 100129716 | 239395_at | -0.0011 | 0.9984 | |
| GSE26886 | ARRDC3-AS1 | 100129716 | 239395_at | -0.0278 | 0.8919 | |
| GSE45670 | ARRDC3-AS1 | 100129716 | 239395_at | 0.0152 | 0.9095 | |
| GSE63941 | ARRDC3-AS1 | 100129716 | 239395_at | 0.4604 | 0.0471 | |
| GSE77861 | ARRDC3-AS1 | 100129716 | 239395_at | -0.0638 | 0.6497 | |
| SRP007169 | ARRDC3-AS1 | 100129716 | RNAseq | -0.5405 | 0.4205 | |
| SRP064894 | ARRDC3-AS1 | 100129716 | RNAseq | -0.0245 | 0.9127 | |
| SRP133303 | ARRDC3-AS1 | 100129716 | RNAseq | 0.1865 | 0.2336 | |
| SRP159526 | ARRDC3-AS1 | 100129716 | RNAseq | 0.1658 | 0.6948 | |
| SRP193095 | ARRDC3-AS1 | 100129716 | RNAseq | -0.1337 | 0.2022 | |
| SRP219564 | ARRDC3-AS1 | 100129716 | RNAseq | -0.3043 | 0.5630 |
Upregulated datasets: 0; Downregulated datasets: 0.
Copy number change of ARRDC3-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | ARRDC3-AS1 | 100129716 | 1 | 14 | 15 | |
| GSE20123 | ARRDC3-AS1 | 100129716 | 1 | 14 | 15 | |
| GSE43470 | ARRDC3-AS1 | 100129716 | 2 | 10 | 31 | |
| GSE46452 | ARRDC3-AS1 | 100129716 | 0 | 28 | 31 | |
| GSE47630 | ARRDC3-AS1 | 100129716 | 1 | 20 | 19 | |
| GSE54993 | ARRDC3-AS1 | 100129716 | 8 | 1 | 61 | |
| GSE54994 | ARRDC3-AS1 | 100129716 | 1 | 18 | 34 | |
| GSE60625 | ARRDC3-AS1 | 100129716 | 0 | 0 | 11 | |
| GSE74703 | ARRDC3-AS1 | 100129716 | 1 | 8 | 27 | |
| GSE74704 | ARRDC3-AS1 | 100129716 | 1 | 7 | 12 |
Total number of gains: 16; Total number of losses: 120; Total Number of normals: 256.
Somatic mutations of ARRDC3-AS1:
Generating mutation plots.
Highly correlated genes for ARRDC3-AS1:
Showing top 20/40 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| ARRDC3-AS1 | IL20RB | 0.665611 | 3 | 0 | 3 |
| ARRDC3-AS1 | B4GALNT3 | 0.642841 | 3 | 0 | 3 |
| ARRDC3-AS1 | GATA4 | 0.635121 | 3 | 0 | 3 |
| ARRDC3-AS1 | TRIM7 | 0.62725 | 3 | 0 | 3 |
| ARRDC3-AS1 | EXOC3L1 | 0.627196 | 3 | 0 | 3 |
| ARRDC3-AS1 | IL27 | 0.614384 | 4 | 0 | 4 |
| ARRDC3-AS1 | EPHB3 | 0.608888 | 3 | 0 | 3 |
| ARRDC3-AS1 | NEDD8 | 0.607691 | 3 | 0 | 3 |
| ARRDC3-AS1 | DNAH6 | 0.606251 | 4 | 0 | 3 |
| ARRDC3-AS1 | PLS3 | 0.605479 | 3 | 0 | 3 |
| ARRDC3-AS1 | PKM | 0.595924 | 3 | 0 | 3 |
| ARRDC3-AS1 | TMPRSS6 | 0.593283 | 3 | 0 | 3 |
| ARRDC3-AS1 | SLC22A8 | 0.590035 | 3 | 0 | 3 |
| ARRDC3-AS1 | GJB3 | 0.587752 | 5 | 0 | 4 |
| ARRDC3-AS1 | S1PR5 | 0.586108 | 3 | 0 | 3 |
| ARRDC3-AS1 | CSF2 | 0.578917 | 3 | 0 | 3 |
| ARRDC3-AS1 | RBPJL | 0.57693 | 3 | 0 | 3 |
| ARRDC3-AS1 | ADAMTSL5 | 0.56996 | 4 | 0 | 3 |
| ARRDC3-AS1 | FAM215A | 0.568213 | 4 | 0 | 3 |
| ARRDC3-AS1 | DNAH10 | 0.56455 | 3 | 0 | 3 |
For details and further investigation, click here
