JMJD4

 

Full name: jumonji domain containing 4 Alias Symbol: FLJ12517
Type: protein-coding gene Cytoband: 1q42.13
Entrez ID: 65094 HGNC ID: HGNC:25724 Ensembl Gene: ENSG00000081692 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of JMJD4:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 JMJD4 65094 222671_s_at 0.8340 0.0842
GSE20347 JMJD4 65094 218560_s_at 0.2449 0.0088
GSE23400 JMJD4 65094 218560_s_at -0.1156 0.0032
GSE26886 JMJD4 65094 218560_s_at 0.6070 0.0017
GSE29001 JMJD4 65094 218560_s_at 0.1161 0.5053
GSE38129 JMJD4 65094 218560_s_at 0.2701 0.0025
GSE45670 JMJD4 65094 218560_s_at 0.1193 0.3478
GSE53622 JMJD4 65094 61145 0.3562 0.0001
GSE53624 JMJD4 65094 61145 0.5456 0.0000
GSE63941 JMJD4 65094 222671_s_at 0.2791 0.4874
GSE77861 JMJD4 65094 222671_s_at 0.0399 0.8182
GSE97050 JMJD4 65094 A_33_P3306113 0.0446 0.8728
SRP007169 JMJD4 65094 RNAseq 0.2823 0.5858
SRP008496 JMJD4 65094 RNAseq 0.2788 0.4807
SRP064894 JMJD4 65094 RNAseq 0.5399 0.0555
SRP133303 JMJD4 65094 RNAseq 0.0506 0.7477
SRP159526 JMJD4 65094 RNAseq 0.5691 0.1653
SRP193095 JMJD4 65094 RNAseq 0.2853 0.0122
SRP219564 JMJD4 65094 RNAseq 0.3396 0.4364
TCGA JMJD4 65094 RNAseq 0.1559 0.0163

Upregulated datasets: 0; Downregulated datasets: 0.  

 

Survival by JMJD4 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of JMJD4:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 JMJD4 65094 11 0 19
GSE20123 JMJD4 65094 11 0 19
GSE43470 JMJD4 65094 7 1 35
GSE46452 JMJD4 65094 3 1 55
GSE47630 JMJD4 65094 15 0 25
GSE54993 JMJD4 65094 0 6 64
GSE54994 JMJD4 65094 17 0 36
GSE60625 JMJD4 65094 0 0 11
GSE74703 JMJD4 65094 7 1 28
GSE74704 JMJD4 65094 5 0 15
TCGA JMJD4 65094 45 2 49

Total number of gains: 121; Total number of losses: 11; Total Number of normals: 356.  

 

Somatic mutations of JMJD4:

 

Generating mutation plots.

 

Highly correlated genes for JMJD4:

 

Showing top 20/780 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
JMJD4PPP6R10.832075303
JMJD4DAPK30.761939404
JMJD4ZFYVE270.754261303
JMJD4EGLN20.748898303
JMJD4MED150.745469303
JMJD4HAVCR20.743561303
JMJD4MRPL360.743214303
JMJD4ARHGEF160.742789303
JMJD4SLC39A30.739121303
JMJD4TP53I110.73843404
JMJD4MAP3K20.734964303
JMJD4EIF3L0.728187303
JMJD4KRTCAP20.723789303
JMJD4NAF10.713304303
JMJD4LY6E0.701776303
JMJD4C19orf470.69544303
JMJD4CSNK2B0.69291303
JMJD4PTOV10.691835505
JMJD4TBCD0.687952303
JMJD4METTL230.68722504

For details and further investigation, click here