C8orf58

 

Full name: chromosome 8 open reading frame 58 Alias Symbol: FLJ34715
Type: protein-coding gene Cytoband: 8p21.3
Entrez ID: 541565 HGNC ID: HGNC:32233 Ensembl Gene: ENSG00000241852 OMIM ID: 
Drug and gene relationship at DGIdb

 

Expression of C8orf58:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 C8orf58 541565 227263_at 0.3989 0.4440
GSE26886 C8orf58 541565 236296_x_at 0.1846 0.1270
GSE45670 C8orf58 541565 227263_at 0.0359 0.8579
GSE53622 C8orf58 541565 80833 -0.5550 0.0000
GSE53624 C8orf58 541565 80833 -0.4400 0.0000
GSE63941 C8orf58 541565 236296_x_at -0.0063 0.9735
GSE77861 C8orf58 541565 227263_at 0.3827 0.1473
GSE97050 C8orf58 541565 A_33_P3410849 -0.3238 0.2252
SRP007169 C8orf58 541565 RNAseq 0.0986 0.8181
SRP008496 C8orf58 541565 RNAseq 0.3249 0.3312
SRP064894 C8orf58 541565 RNAseq 0.0855 0.6612
SRP133303 C8orf58 541565 RNAseq -0.2257 0.4536
SRP159526 C8orf58 541565 RNAseq 0.0292 0.9486
SRP193095 C8orf58 541565 RNAseq 0.4761 0.0055
SRP219564 C8orf58 541565 RNAseq -0.0199 0.9441
TCGA C8orf58 541565 RNAseq 0.1660 0.0541

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by C8orf58 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of C8orf58:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 C8orf58 541565 4 10 16
GSE20123 C8orf58 541565 4 10 16
GSE43470 C8orf58 541565 4 9 30
GSE46452 C8orf58 541565 13 13 33
GSE47630 C8orf58 541565 10 8 22
GSE54993 C8orf58 541565 2 14 54
GSE54994 C8orf58 541565 10 17 26
GSE60625 C8orf58 541565 3 0 8
GSE74703 C8orf58 541565 4 7 25
GSE74704 C8orf58 541565 3 7 10
TCGA C8orf58 541565 14 43 39

Total number of gains: 71; Total number of losses: 138; Total Number of normals: 279.  


 

Somatic mutations of C8orf58:

 

Generating mutation plots.

 

Highly correlated genes for C8orf58:

 

Showing top 20/57 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
C8orf58CCL160.741057303
C8orf58TMEM1740.705594303
C8orf58VMAC0.698705303
C8orf58BPTF0.696357303
C8orf58MOG0.681763403
C8orf58TBCE0.677131303
C8orf58TGIF10.671071303
C8orf58ALDH4A10.662131303
C8orf58USP20.642193303
C8orf58DUSP80.637311303
C8orf58DMTN0.624729303
C8orf58SLC9A10.610208303
C8orf58SFXN50.609594403
C8orf58KRT810.606607504
C8orf58HMHB10.605701403
C8orf58ARHGAP40.602315404
C8orf58SOX170.600399403
C8orf58GNAT10.599409303
C8orf58GPR1530.591303403
C8orf58PSD0.589619404

For details and further investigation, click here