| Full name: coiled-coil domain containing 42 | Alias Symbol: FLJ32734|CCDC42A | ||
| Type: protein-coding gene | Cytoband: 17p13.1 | ||
| Entrez ID: 146849 | HGNC ID: HGNC:26528 | Ensembl Gene: ENSG00000161973 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of CCDC42:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CCDC42 | 146849 | 230881_at | -0.0675 | 0.7192 | |
| GSE26886 | CCDC42 | 146849 | 230881_at | 0.2717 | 0.0309 | |
| GSE45670 | CCDC42 | 146849 | 230881_at | 0.1568 | 0.0222 | |
| GSE53622 | CCDC42 | 146849 | 29036 | 0.1821 | 0.0004 | |
| GSE53624 | CCDC42 | 146849 | 29036 | 0.2603 | 0.0000 | |
| GSE63941 | CCDC42 | 146849 | 230881_at | 0.0797 | 0.6901 | |
| GSE77861 | CCDC42 | 146849 | 230881_at | -0.0413 | 0.7301 | |
| GSE97050 | CCDC42 | 146849 | A_23_P402176 | -0.1030 | 0.6146 | |
| TCGA | CCDC42 | 146849 | RNAseq | 1.7962 | 0.0547 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by CCDC42 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CCDC42:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CCDC42 | 146849 | 3 | 2 | 25 | |
| GSE20123 | CCDC42 | 146849 | 3 | 3 | 24 | |
| GSE43470 | CCDC42 | 146849 | 1 | 6 | 36 | |
| GSE46452 | CCDC42 | 146849 | 34 | 1 | 24 | |
| GSE47630 | CCDC42 | 146849 | 7 | 1 | 32 | |
| GSE54993 | CCDC42 | 146849 | 4 | 3 | 63 | |
| GSE54994 | CCDC42 | 146849 | 5 | 8 | 40 | |
| GSE60625 | CCDC42 | 146849 | 4 | 0 | 7 | |
| GSE74703 | CCDC42 | 146849 | 1 | 3 | 32 | |
| GSE74704 | CCDC42 | 146849 | 1 | 1 | 18 | |
| TCGA | CCDC42 | 146849 | 18 | 20 | 58 |
Total number of gains: 81; Total number of losses: 48; Total Number of normals: 359.
Somatic mutations of CCDC42:
Generating mutation plots.
Highly correlated genes for CCDC42:
Showing top 20/172 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CCDC42 | MOS | 0.797869 | 3 | 0 | 3 |
| CCDC42 | CBLN4 | 0.781536 | 3 | 0 | 3 |
| CCDC42 | OR2T1 | 0.761564 | 3 | 0 | 3 |
| CCDC42 | CHRD | 0.753259 | 3 | 0 | 3 |
| CCDC42 | GPR78 | 0.75211 | 3 | 0 | 3 |
| CCDC42 | CLDN14 | 0.751849 | 3 | 0 | 3 |
| CCDC42 | OR2A5 | 0.74474 | 3 | 0 | 3 |
| CCDC42 | CD300LG | 0.740306 | 3 | 0 | 3 |
| CCDC42 | OR1F1 | 0.73509 | 3 | 0 | 3 |
| CCDC42 | MYO18B | 0.734959 | 3 | 0 | 3 |
| CCDC42 | MYLK2 | 0.733723 | 4 | 0 | 4 |
| CCDC42 | MC3R | 0.728422 | 3 | 0 | 3 |
| CCDC42 | SNED1 | 0.72809 | 4 | 0 | 4 |
| CCDC42 | NPAS1 | 0.725359 | 3 | 0 | 3 |
| CCDC42 | OR10W1 | 0.724536 | 3 | 0 | 3 |
| CCDC42 | DNAH6 | 0.723652 | 3 | 0 | 3 |
| CCDC42 | DDC | 0.721242 | 3 | 0 | 3 |
| CCDC42 | PSMB11 | 0.720873 | 3 | 0 | 3 |
| CCDC42 | ADORA1 | 0.713455 | 3 | 0 | 3 |
| CCDC42 | KCNJ13 | 0.709121 | 4 | 0 | 3 |
For details and further investigation, click here
