| Full name: chondroitin polymerizing factor 2 | Alias Symbol: KIAA1402|ChSy-3|CSGlcA-T | ||
| Type: protein-coding gene | Cytoband: 7q36.1 | ||
| Entrez ID: 54480 | HGNC ID: HGNC:29270 | Ensembl Gene: ENSG00000033100 | OMIM ID: 608037 |
| Drug and gene relationship at DGIdb | |||
Expression of CHPF2:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CHPF2 | 54480 | 55093_at | 0.6707 | 0.0224 | |
| GSE20347 | CHPF2 | 54480 | 55093_at | 0.5536 | 0.0000 | |
| GSE23400 | CHPF2 | 54480 | 55093_at | 0.3466 | 0.0000 | |
| GSE26886 | CHPF2 | 54480 | 55093_at | 0.9961 | 0.0000 | |
| GSE29001 | CHPF2 | 54480 | 55093_at | 0.2877 | 0.1876 | |
| GSE38129 | CHPF2 | 54480 | 55093_at | 0.6432 | 0.0000 | |
| GSE45670 | CHPF2 | 54480 | 55093_at | 0.4008 | 0.0019 | |
| GSE53622 | CHPF2 | 54480 | 37634 | 0.8580 | 0.0000 | |
| GSE53624 | CHPF2 | 54480 | 37634 | 0.8320 | 0.0000 | |
| GSE63941 | CHPF2 | 54480 | 55093_at | -1.9165 | 0.0008 | |
| GSE77861 | CHPF2 | 54480 | 55093_at | 0.4903 | 0.0213 | |
| GSE97050 | CHPF2 | 54480 | A_23_P397055 | 0.6074 | 0.1657 | |
| SRP007169 | CHPF2 | 54480 | RNAseq | 0.8827 | 0.0250 | |
| SRP008496 | CHPF2 | 54480 | RNAseq | 0.8424 | 0.0166 | |
| SRP064894 | CHPF2 | 54480 | RNAseq | 1.0868 | 0.0000 | |
| SRP133303 | CHPF2 | 54480 | RNAseq | 0.8553 | 0.0000 | |
| SRP159526 | CHPF2 | 54480 | RNAseq | 0.6594 | 0.0106 | |
| SRP193095 | CHPF2 | 54480 | RNAseq | 0.6988 | 0.0000 | |
| SRP219564 | CHPF2 | 54480 | RNAseq | 0.7526 | 0.0334 | |
| TCGA | CHPF2 | 54480 | RNAseq | 0.0157 | 0.7574 |
Upregulated datasets: 1; Downregulated datasets: 1.
Survival by CHPF2 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CHPF2:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CHPF2 | 54480 | 2 | 4 | 24 | |
| GSE20123 | CHPF2 | 54480 | 2 | 4 | 24 | |
| GSE43470 | CHPF2 | 54480 | 2 | 5 | 36 | |
| GSE46452 | CHPF2 | 54480 | 7 | 2 | 50 | |
| GSE47630 | CHPF2 | 54480 | 5 | 9 | 26 | |
| GSE54993 | CHPF2 | 54480 | 3 | 3 | 64 | |
| GSE54994 | CHPF2 | 54480 | 5 | 8 | 40 | |
| GSE60625 | CHPF2 | 54480 | 0 | 0 | 11 | |
| GSE74703 | CHPF2 | 54480 | 2 | 4 | 30 | |
| GSE74704 | CHPF2 | 54480 | 1 | 4 | 15 | |
| TCGA | CHPF2 | 54480 | 28 | 25 | 43 |
Total number of gains: 57; Total number of losses: 68; Total Number of normals: 363.
Somatic mutations of CHPF2:
Generating mutation plots.
Highly correlated genes for CHPF2:
Showing top 20/693 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CHPF2 | TSPO2 | 0.806633 | 3 | 0 | 3 |
| CHPF2 | ADAMTS12 | 0.745766 | 7 | 0 | 6 |
| CHPF2 | P4HA2 | 0.741589 | 3 | 0 | 3 |
| CHPF2 | C19orf48 | 0.719025 | 3 | 0 | 3 |
| CHPF2 | SLC5A12 | 0.71202 | 3 | 0 | 3 |
| CHPF2 | C4orf48 | 0.706771 | 8 | 0 | 7 |
| CHPF2 | HOMER3 | 0.702382 | 12 | 0 | 12 |
| CHPF2 | KIF26B | 0.699421 | 9 | 0 | 7 |
| CHPF2 | KIAA0930 | 0.695982 | 10 | 0 | 8 |
| CHPF2 | BID | 0.693638 | 10 | 0 | 10 |
| CHPF2 | TTYH3 | 0.69309 | 7 | 0 | 7 |
| CHPF2 | YRDC | 0.692945 | 3 | 0 | 3 |
| CHPF2 | PLBD2 | 0.690305 | 8 | 0 | 8 |
| CHPF2 | DNAJB11 | 0.687687 | 5 | 0 | 5 |
| CHPF2 | CBX3 | 0.685435 | 10 | 0 | 9 |
| CHPF2 | NCAPG2 | 0.684465 | 8 | 0 | 8 |
| CHPF2 | SHC1 | 0.682096 | 10 | 0 | 10 |
| CHPF2 | GALNS | 0.681203 | 12 | 0 | 10 |
| CHPF2 | RFX8 | 0.680465 | 3 | 0 | 3 |
| CHPF2 | TPM3 | 0.678785 | 5 | 0 | 5 |
For details and further investigation, click here
