| Full name: chromosome 19 open reading frame 48 | Alias Symbol: MGC13170|BC006151 | ||
| Type: protein-coding gene | Cytoband: 19q13.33 | ||
| Entrez ID: 84798 | HGNC ID: HGNC:29667 | Ensembl Gene: ENSG00000167747 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of C19orf48:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE53622 | C19orf48 | 84798 | 18765 | 0.7232 | 0.0000 | |
| GSE53624 | C19orf48 | 84798 | 30823 | 0.9365 | 0.0000 | |
| GSE97050 | C19orf48 | 84798 | A_33_P3288754 | 0.5075 | 0.1456 | |
| SRP007169 | C19orf48 | 84798 | RNAseq | 0.6628 | 0.1278 | |
| SRP008496 | C19orf48 | 84798 | RNAseq | 0.6196 | 0.0160 | |
| SRP064894 | C19orf48 | 84798 | RNAseq | 1.2614 | 0.0003 | |
| SRP133303 | C19orf48 | 84798 | RNAseq | 0.9752 | 0.0002 | |
| SRP159526 | C19orf48 | 84798 | RNAseq | 1.1902 | 0.0023 | |
| SRP193095 | C19orf48 | 84798 | RNAseq | 0.6652 | 0.0001 | |
| SRP219564 | C19orf48 | 84798 | RNAseq | 1.0705 | 0.0217 | |
| TCGA | C19orf48 | 84798 | RNAseq | 0.4162 | 0.0000 |
Upregulated datasets: 3; Downregulated datasets: 0.
Survival by C19orf48 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of C19orf48:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | C19orf48 | 84798 | 3 | 4 | 23 | |
| GSE20123 | C19orf48 | 84798 | 3 | 3 | 24 | |
| GSE43470 | C19orf48 | 84798 | 4 | 11 | 28 | |
| GSE46452 | C19orf48 | 84798 | 45 | 1 | 13 | |
| GSE47630 | C19orf48 | 84798 | 9 | 6 | 25 | |
| GSE54993 | C19orf48 | 84798 | 17 | 4 | 49 | |
| GSE54994 | C19orf48 | 84798 | 4 | 14 | 35 | |
| GSE60625 | C19orf48 | 84798 | 9 | 0 | 2 | |
| GSE74703 | C19orf48 | 84798 | 4 | 7 | 25 | |
| GSE74704 | C19orf48 | 84798 | 3 | 1 | 16 | |
| TCGA | C19orf48 | 84798 | 14 | 19 | 63 |
Total number of gains: 115; Total number of losses: 70; Total Number of normals: 303.
Somatic mutations of C19orf48:
Generating mutation plots.
Highly correlated genes for C19orf48:
Showing top 20/174 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| C19orf48 | CDCA8 | 0.795012 | 3 | 0 | 3 |
| C19orf48 | RUVBL2 | 0.787018 | 3 | 0 | 3 |
| C19orf48 | MCM7 | 0.778389 | 3 | 0 | 3 |
| C19orf48 | RNASEH2A | 0.77724 | 3 | 0 | 3 |
| C19orf48 | TARBP2 | 0.773173 | 3 | 0 | 3 |
| C19orf48 | EXO1 | 0.770149 | 3 | 0 | 3 |
| C19orf48 | CKS2 | 0.769394 | 3 | 0 | 3 |
| C19orf48 | TIMM50 | 0.76301 | 3 | 0 | 3 |
| C19orf48 | STIL | 0.757646 | 3 | 0 | 3 |
| C19orf48 | ASF1B | 0.747022 | 3 | 0 | 3 |
| C19orf48 | MCM2 | 0.745954 | 3 | 0 | 3 |
| C19orf48 | DLGAP5 | 0.744083 | 3 | 0 | 3 |
| C19orf48 | EIF3B | 0.738781 | 3 | 0 | 3 |
| C19orf48 | LRR1 | 0.736987 | 3 | 0 | 3 |
| C19orf48 | COL10A1 | 0.734742 | 3 | 0 | 3 |
| C19orf48 | SPC25 | 0.732221 | 3 | 0 | 3 |
| C19orf48 | MMP11 | 0.730952 | 3 | 0 | 3 |
| C19orf48 | KIF4A | 0.727092 | 3 | 0 | 3 |
| C19orf48 | FANCG | 0.725639 | 3 | 0 | 3 |
| C19orf48 | LIG1 | 0.725521 | 3 | 0 | 3 |
For details and further investigation, click here
