CLDN8

 

Full name: claudin 8 Alias Symbol: 
Type: protein-coding gene Cytoband: 21q22.11
Entrez ID: 9073 HGNC ID: HGNC:2050 Ensembl Gene: ENSG00000156284 OMIM ID: 611231
Drug and gene relationship at DGIdb

 

CLDN8 involved pathways:

KEGG pathway Description View
hsa04530Tight junction

 

Expression of CLDN8:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CLDN8 9073 214598_at -1.2569 0.5258
GSE20347 CLDN8 9073 214598_at -0.7119 0.1763
GSE23400 CLDN8 9073 214598_at -0.0754 0.6136
GSE26886 CLDN8 9073 214598_at -1.1412 0.0322
GSE29001 CLDN8 9073 214598_at -1.7839 0.0002
GSE38129 CLDN8 9073 214598_at -0.2065 0.6955
GSE45670 CLDN8 9073 214598_at -0.8465 0.2131
GSE53622 CLDN8 9073 8989 -1.2112 0.0008
GSE53624 CLDN8 9073 8989 -2.5036 0.0000
GSE63941 CLDN8 9073 214598_at 1.1273 0.2581
GSE77861 CLDN8 9073 214598_at -0.2442 0.7766
SRP007169 CLDN8 9073 RNAseq -0.3874 0.7083
SRP064894 CLDN8 9073 RNAseq -1.3973 0.1140
SRP133303 CLDN8 9073 RNAseq 0.8992 0.3839
SRP159526 CLDN8 9073 RNAseq 1.8513 0.2278
TCGA CLDN8 9073 RNAseq 1.3138 0.0355

Upregulated datasets: 1; Downregulated datasets: 4.  


 

Survival by CLDN8 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CLDN8:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CLDN8 9073 2 9 19
GSE20123 CLDN8 9073 2 9 19
GSE43470 CLDN8 9073 2 9 32
GSE46452 CLDN8 9073 1 21 37
GSE47630 CLDN8 9073 6 17 17
GSE54993 CLDN8 9073 9 1 60
GSE54994 CLDN8 9073 1 9 43
GSE60625 CLDN8 9073 0 0 11
GSE74703 CLDN8 9073 2 6 28
GSE74704 CLDN8 9073 2 6 12
TCGA CLDN8 9073 8 38 50

Total number of gains: 35; Total number of losses: 125; Total Number of normals: 328.  


 

Somatic mutations of CLDN8:

 

Generating mutation plots.

 

Highly correlated genes for CLDN8:

 

Showing top 20/234 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CLDN8MBNL30.660404403
CLDN8TNNT30.656985303
CLDN8IFNAR10.651182303
CLDN8ZNF850.634849403
CLDN8HYKK0.633833303
CLDN8REPS10.633414403
CLDN8TCEA30.632514403
CLDN8RIPK40.618799706
CLDN8EFHC20.617258303
CLDN8ALKBH70.612363403
CLDN8ST6GALNAC10.612295605
CLDN8SNX310.610539504
CLDN8CYP4F30.599521109
CLDN8CTDSP10.598737403
CLDN8PAIP2B0.598539504
CLDN8FAM3B0.595866504
CLDN8KRT150.59401908
CLDN8CACNB40.591024303
CLDN8ZNF518A0.589674404
CLDN8SAMD130.589313403

For details and further investigation, click here