| Full name: C-type lectin domain family 4 member F | Alias Symbol: FLJ39110|KCLR | ||
| Type: protein-coding gene | Cytoband: 2p13.3 | ||
| Entrez ID: 165530 | HGNC ID: HGNC:25357 | Ensembl Gene: ENSG00000152672 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of CLEC4F:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | CLEC4F | 165530 | 1552410_at | -0.2395 | 0.3020 | |
| GSE26886 | CLEC4F | 165530 | 1552410_at | -0.5680 | 0.0001 | |
| GSE45670 | CLEC4F | 165530 | 1552410_at | -0.2990 | 0.0016 | |
| GSE53622 | CLEC4F | 165530 | 78521 | -1.5621 | 0.0000 | |
| GSE53624 | CLEC4F | 165530 | 78521 | -2.3302 | 0.0000 | |
| GSE63941 | CLEC4F | 165530 | 1552410_at | 0.0859 | 0.5009 | |
| GSE77861 | CLEC4F | 165530 | 1552410_at | -0.2547 | 0.0168 | |
| SRP064894 | CLEC4F | 165530 | RNAseq | -1.6131 | 0.0000 | |
| SRP133303 | CLEC4F | 165530 | RNAseq | -2.8222 | 0.0000 | |
| SRP159526 | CLEC4F | 165530 | RNAseq | -1.3556 | 0.1449 | |
| SRP219564 | CLEC4F | 165530 | RNAseq | -1.9845 | 0.0001 | |
| TCGA | CLEC4F | 165530 | RNAseq | 0.1456 | 0.8065 |
Upregulated datasets: 0; Downregulated datasets: 5.
Survival by CLEC4F expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of CLEC4F:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | CLEC4F | 165530 | 11 | 1 | 18 | |
| GSE20123 | CLEC4F | 165530 | 11 | 1 | 18 | |
| GSE43470 | CLEC4F | 165530 | 3 | 0 | 40 | |
| GSE46452 | CLEC4F | 165530 | 2 | 3 | 54 | |
| GSE47630 | CLEC4F | 165530 | 7 | 0 | 33 | |
| GSE54993 | CLEC4F | 165530 | 0 | 6 | 64 | |
| GSE54994 | CLEC4F | 165530 | 11 | 0 | 42 | |
| GSE60625 | CLEC4F | 165530 | 0 | 3 | 8 | |
| GSE74703 | CLEC4F | 165530 | 3 | 0 | 33 | |
| GSE74704 | CLEC4F | 165530 | 9 | 0 | 11 | |
| TCGA | CLEC4F | 165530 | 37 | 2 | 57 |
Total number of gains: 94; Total number of losses: 16; Total Number of normals: 378.
Somatic mutations of CLEC4F:
Generating mutation plots.
Highly correlated genes for CLEC4F:
Showing top 20/854 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| CLEC4F | DEF6 | 0.701667 | 3 | 0 | 3 |
| CLEC4F | ALDH9A1 | 0.698955 | 6 | 0 | 6 |
| CLEC4F | BBOX1 | 0.692529 | 6 | 0 | 6 |
| CLEC4F | PAIP2B | 0.690963 | 5 | 0 | 5 |
| CLEC4F | TP53I3 | 0.689822 | 6 | 0 | 6 |
| CLEC4F | SAMD5 | 0.688739 | 6 | 0 | 6 |
| CLEC4F | CYP4F12 | 0.688005 | 4 | 0 | 4 |
| CLEC4F | FNDC4 | 0.686642 | 6 | 0 | 6 |
| CLEC4F | ACOX3 | 0.685691 | 5 | 0 | 4 |
| CLEC4F | CXCR2 | 0.681987 | 6 | 0 | 5 |
| CLEC4F | TF | 0.680627 | 4 | 0 | 4 |
| CLEC4F | IL22RA1 | 0.679075 | 3 | 0 | 3 |
| CLEC4F | SLC25A51 | 0.675687 | 4 | 0 | 3 |
| CLEC4F | SNORA68 | 0.675389 | 4 | 0 | 4 |
| CLEC4F | PAQR8 | 0.674873 | 6 | 0 | 6 |
| CLEC4F | APOB | 0.674155 | 3 | 0 | 3 |
| CLEC4F | SLC16A6 | 0.673077 | 6 | 0 | 6 |
| CLEC4F | APPL1 | 0.670818 | 5 | 0 | 5 |
| CLEC4F | GLI4 | 0.668301 | 3 | 0 | 3 |
| CLEC4F | NAGK | 0.666097 | 6 | 0 | 6 |
For details and further investigation, click here
