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Multi-Omics Database of ESCC

 

CLEC4G

 

Full name: C-type lectin domain family 4 member G Alias Symbol: UNQ431|LSECtin
Type: protein-coding gene Cytoband: 19p13.2
Entrez ID: 339390 HGNC ID: HGNC:24591 Ensembl Gene: ENSG00000182566 OMIM ID: 616256
Drug and gene relationship at DGIdb

 

Expression of CLEC4G:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CLEC4G 339390 1559065_a_at -0.2070 0.5476
GSE26886 CLEC4G 339390 1559065_a_at 0.0492 0.7073
GSE45670 CLEC4G 339390 1559065_a_at -0.1275 0.1631
GSE53622 CLEC4G 339390 51456 -0.2290 0.0014
GSE53624 CLEC4G 339390 51456 -0.3134 0.0006
GSE63941 CLEC4G 339390 1559065_a_at -0.2503 0.1008
GSE77861 CLEC4G 339390 1559065_a_at -0.0677 0.5066
GSE97050 CLEC4G 339390 A_23_P153390 -0.0680 0.7983
TCGA CLEC4G 339390 RNAseq -0.6374 0.4719

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by CLEC4G expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CLEC4G:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CLEC4G 339390 4 3 23
GSE20123 CLEC4G 339390 3 2 25
GSE43470 CLEC4G 339390 2 6 35
GSE46452 CLEC4G 339390 47 1 11
GSE47630 CLEC4G 339390 5 7 28
GSE54993 CLEC4G 339390 16 3 51
GSE54994 CLEC4G 339390 6 13 34
GSE60625 CLEC4G 339390 9 0 2
GSE74703 CLEC4G 339390 2 4 30
GSE74704 CLEC4G 339390 0 2 18
TCGA CLEC4G 339390 9 20 67

Total number of gains: 103; Total number of losses: 61; Total Number of normals: 324.  


 

Somatic mutations of CLEC4G:

 

Generating mutation plots.

 

Highly correlated genes for CLEC4G:

 

Showing top 20/82 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CLEC4GFGF170.77268303
CLEC4GCACNA1I0.752334303
CLEC4GFRMD10.743129303
CLEC4GKRTAP19-10.739014303
CLEC4GSHD0.729982303
CLEC4GSNAI10.707101303
CLEC4GNLRP60.698873303
CLEC4GSYCE30.697784303
CLEC4GKANK30.692768404
CLEC4GGPR780.682528303
CLEC4GCACNG80.681866404
CLEC4GMYH130.671695303
CLEC4GPRSS540.671035303
CLEC4GC20orf850.670082403
CLEC4GC8G0.667864403
CLEC4GNOBOX0.665956403
CLEC4GPALM30.665419403
CLEC4GTOR2A0.658975404
CLEC4GGLTPD20.655919303
CLEC4GOR4D20.651212403

For details and further investigation, click here