| Full name: collagen type XXIV alpha 1 chain | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 1p22.3 | ||
| Entrez ID: 255631 | HGNC ID: HGNC:20821 | Ensembl Gene: ENSG00000171502 | OMIM ID: 610025 |
| Drug and gene relationship at DGIdb | |||
Expression of COL24A1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | COL24A1 | 255631 | 238732_at | 0.3398 | 0.5271 | |
| GSE26886 | COL24A1 | 255631 | 238732_at | 1.1297 | 0.0000 | |
| GSE45670 | COL24A1 | 255631 | 238732_at | 0.1654 | 0.5664 | |
| GSE53622 | COL24A1 | 255631 | 25269 | 1.2740 | 0.0000 | |
| GSE53624 | COL24A1 | 255631 | 77167 | 2.4972 | 0.0000 | |
| GSE63941 | COL24A1 | 255631 | 238732_at | -0.6269 | 0.0215 | |
| GSE77861 | COL24A1 | 255631 | 238732_at | 0.0691 | 0.4711 | |
| GSE97050 | COL24A1 | 255631 | A_23_P74701 | -0.2114 | 0.5823 | |
| SRP007169 | COL24A1 | 255631 | RNAseq | 5.3769 | 0.0001 | |
| SRP133303 | COL24A1 | 255631 | RNAseq | 2.1822 | 0.0000 | |
| SRP159526 | COL24A1 | 255631 | RNAseq | 1.0938 | 0.0278 | |
| SRP193095 | COL24A1 | 255631 | RNAseq | 2.1114 | 0.0000 | |
| SRP219564 | COL24A1 | 255631 | RNAseq | 0.7602 | 0.4748 | |
| TCGA | COL24A1 | 255631 | RNAseq | 1.4730 | 0.0000 |
Upregulated datasets: 8; Downregulated datasets: 0.
Survival by COL24A1 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of COL24A1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | COL24A1 | 255631 | 0 | 8 | 22 | |
| GSE20123 | COL24A1 | 255631 | 0 | 8 | 22 | |
| GSE43470 | COL24A1 | 255631 | 2 | 4 | 37 | |
| GSE46452 | COL24A1 | 255631 | 1 | 1 | 57 | |
| GSE47630 | COL24A1 | 255631 | 8 | 5 | 27 | |
| GSE54993 | COL24A1 | 255631 | 0 | 1 | 69 | |
| GSE54994 | COL24A1 | 255631 | 6 | 3 | 44 | |
| GSE60625 | COL24A1 | 255631 | 0 | 0 | 11 | |
| GSE74703 | COL24A1 | 255631 | 1 | 3 | 32 | |
| GSE74704 | COL24A1 | 255631 | 0 | 5 | 15 | |
| TCGA | COL24A1 | 255631 | 6 | 23 | 67 |
Total number of gains: 24; Total number of losses: 61; Total Number of normals: 403.
Somatic mutations of COL24A1:
Generating mutation plots.
Highly correlated genes for COL24A1:
Showing top 20/252 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| COL24A1 | CDC42EP2 | 0.757967 | 3 | 0 | 3 |
| COL24A1 | ZNF446 | 0.747834 | 3 | 0 | 3 |
| COL24A1 | ASMTL | 0.72804 | 3 | 0 | 3 |
| COL24A1 | ZMYND15 | 0.721128 | 3 | 0 | 3 |
| COL24A1 | TUT1 | 0.715874 | 3 | 0 | 3 |
| COL24A1 | CHST10 | 0.712725 | 3 | 0 | 3 |
| COL24A1 | RCN3 | 0.702377 | 3 | 0 | 3 |
| COL24A1 | NOX1 | 0.695024 | 3 | 0 | 3 |
| COL24A1 | GPC2 | 0.694528 | 3 | 0 | 3 |
| COL24A1 | SEC62 | 0.688535 | 4 | 0 | 4 |
| COL24A1 | CCDC130 | 0.683366 | 3 | 0 | 3 |
| COL24A1 | TMEM104 | 0.673872 | 4 | 0 | 3 |
| COL24A1 | ADAMTS2 | 0.672679 | 6 | 0 | 4 |
| COL24A1 | PRR15 | 0.670588 | 3 | 0 | 3 |
| COL24A1 | ARVCF | 0.670052 | 5 | 0 | 4 |
| COL24A1 | DNMT3B | 0.668015 | 4 | 0 | 4 |
| COL24A1 | THAP3 | 0.667752 | 4 | 0 | 3 |
| COL24A1 | RNF216 | 0.666998 | 4 | 0 | 3 |
| COL24A1 | JMJD6 | 0.662582 | 4 | 0 | 3 |
| COL24A1 | CMC2 | 0.661137 | 5 | 0 | 4 |
For details and further investigation, click here
