CRB3

 

Full name: crumbs cell polarity complex component 3 Alias Symbol: MGC17303
Type: protein-coding gene Cytoband: 19p13.3
Entrez ID: 92359 HGNC ID: HGNC:20237 Ensembl Gene: ENSG00000130545 OMIM ID: 609737
Drug and gene relationship at DGIdb

 

Expression of CRB3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CRB3 92359 232609_at -0.4975 0.1657
GSE26886 CRB3 92359 232609_at -0.4490 0.0034
GSE45670 CRB3 92359 232609_at 0.0126 0.9555
GSE53622 CRB3 92359 42891 -0.8748 0.0000
GSE53624 CRB3 92359 42891 -1.0829 0.0000
GSE63941 CRB3 92359 232609_at 1.7554 0.0008
GSE77861 CRB3 92359 232609_at -0.4563 0.0203
GSE97050 CRB3 92359 A_33_P3256391 0.1189 0.7674
SRP007169 CRB3 92359 RNAseq -1.9803 0.0000
SRP008496 CRB3 92359 RNAseq -2.0898 0.0000
SRP064894 CRB3 92359 RNAseq -1.4818 0.0005
SRP133303 CRB3 92359 RNAseq -0.8391 0.0040
SRP159526 CRB3 92359 RNAseq -1.0331 0.0436
SRP193095 CRB3 92359 RNAseq -1.2966 0.0000
SRP219564 CRB3 92359 RNAseq -1.2744 0.1121
TCGA CRB3 92359 RNAseq -0.1473 0.3382

Upregulated datasets: 1; Downregulated datasets: 6.  


 

Survival by CRB3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CRB3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CRB3 92359 5 3 22
GSE20123 CRB3 92359 4 2 24
GSE43470 CRB3 92359 2 6 35
GSE46452 CRB3 92359 47 1 11
GSE47630 CRB3 92359 5 7 28
GSE54993 CRB3 92359 16 3 51
GSE54994 CRB3 92359 6 14 33
GSE60625 CRB3 92359 9 0 2
GSE74703 CRB3 92359 2 4 30
GSE74704 CRB3 92359 1 2 17
TCGA CRB3 92359 9 19 68

Total number of gains: 106; Total number of losses: 61; Total Number of normals: 321.  


 

Somatic mutations of CRB3:

 

Generating mutation plots.

 

Highly correlated genes for CRB3:

 

Showing top 20/1082 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CRB3DNAH60.773458303
CRB3SH3GL10.751123606
CRB3RASAL10.727829706
CRB3TMEM1410.727624403
CRB3SDCBP20.726463404
CRB3SCNN1B0.722534807
CRB3AMBRA10.721991303
CRB3CEACAM10.720965707
CRB3GRHL10.719915908
CRB3PRSS80.719832606
CRB3ATG9B0.719194707
CRB3EPHA10.719115908
CRB3CAMSAP30.717035808
CRB3EPN30.716725807
CRB3DENND2D0.716412606
CRB3TMEM400.715495908
CRB3GRHL30.715005908
CRB3CLVS10.714084303
CRB3LIPH0.713179808
CRB3MPZL30.711101807

For details and further investigation, click here