CRLF3

 

Full name: cytokine receptor like factor 3 Alias Symbol: CREME9|CYTOR4
Type: protein-coding gene Cytoband: 17q11.2
Entrez ID: 51379 HGNC ID: HGNC:17177 Ensembl Gene: ENSG00000176390 OMIM ID: 614853
Drug and gene relationship at DGIdb

 

Expression of CRLF3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 CRLF3 51379 205474_at -0.0970 0.8997
GSE20347 CRLF3 51379 205474_at -0.2706 0.0864
GSE23400 CRLF3 51379 205474_at -0.0793 0.3924
GSE26886 CRLF3 51379 205474_at -0.1596 0.4035
GSE29001 CRLF3 51379 205474_at -0.2525 0.1778
GSE38129 CRLF3 51379 205474_at 0.0158 0.9321
GSE45670 CRLF3 51379 205474_at 0.0912 0.5568
GSE53622 CRLF3 51379 154876 0.0326 0.6227
GSE53624 CRLF3 51379 154876 -0.1457 0.0240
GSE63941 CRLF3 51379 205474_at 0.4064 0.2394
GSE77861 CRLF3 51379 205474_at -0.0343 0.9250
GSE97050 CRLF3 51379 A_24_P56894 0.0007 0.9975
SRP007169 CRLF3 51379 RNAseq 0.4545 0.2469
SRP008496 CRLF3 51379 RNAseq 0.0620 0.8364
SRP064894 CRLF3 51379 RNAseq -0.5540 0.0382
SRP133303 CRLF3 51379 RNAseq -0.1529 0.2689
SRP159526 CRLF3 51379 RNAseq -0.3660 0.3163
SRP193095 CRLF3 51379 RNAseq -0.3249 0.0004
SRP219564 CRLF3 51379 RNAseq -0.6700 0.1688
TCGA CRLF3 51379 RNAseq 0.2991 0.0000

Upregulated datasets: 0; Downregulated datasets: 0.  


 

Survival by CRLF3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of CRLF3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 CRLF3 51379 7 2 21
GSE20123 CRLF3 51379 8 2 20
GSE43470 CRLF3 51379 0 1 42
GSE46452 CRLF3 51379 33 1 25
GSE47630 CRLF3 51379 7 1 32
GSE54993 CRLF3 51379 2 3 65
GSE54994 CRLF3 51379 7 6 40
GSE60625 CRLF3 51379 4 0 7
GSE74703 CRLF3 51379 0 1 35
GSE74704 CRLF3 51379 5 2 13
TCGA CRLF3 51379 19 11 66

Total number of gains: 92; Total number of losses: 30; Total Number of normals: 366.  


 

Somatic mutations of CRLF3:

 

Generating mutation plots.

 

Highly correlated genes for CRLF3:

 

Showing top 20/229 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
CRLF3KCNK60.784875303
CRLF3ZMYM20.771048404
CRLF3RNGTT0.738454303
CRLF3RNF240.725178303
CRLF3CDK5R10.710763605
CRLF3PHKA10.694644303
CRLF3PSMD140.691175303
CRLF3CYP1A20.688525303
CRLF3TXNDC170.682898303
CRLF3TBC1D20.682215403
CRLF3GAPVD10.679403404
CRLF3HSPA40.671054605
CRLF3SOX70.669445303
CRLF3PREP0.669072303
CRLF3SCOC0.668708303
CRLF3PLA2G4A0.66791403
CRLF3TDRD30.665768303
CRLF3MKRN20.656832303
CRLF3SNRK0.653356404
CRLF3RELL20.652348303

For details and further investigation, click here