GAS2L3

 

Full name: growth arrest specific 2 like 3 Alias Symbol: 
Type: protein-coding gene Cytoband: 12q23.1
Entrez ID: 283431 HGNC ID: HGNC:27475 Ensembl Gene: ENSG00000139354 OMIM ID: 617224
Drug and gene relationship at DGIdb

 

Expression of GAS2L3:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 GAS2L3 283431 238756_at 1.0062 0.0939
GSE26886 GAS2L3 283431 238756_at 0.5786 0.1258
GSE45670 GAS2L3 283431 238756_at 0.2456 0.4023
GSE53622 GAS2L3 283431 72470 0.4444 0.0002
GSE53624 GAS2L3 283431 72470 0.9468 0.0000
GSE63941 GAS2L3 283431 238756_at 0.5912 0.4659
GSE77861 GAS2L3 283431 235709_at 0.0883 0.5442
GSE97050 GAS2L3 283431 A_32_P189204 0.4223 0.3008
SRP007169 GAS2L3 283431 RNAseq 1.3307 0.0059
SRP008496 GAS2L3 283431 RNAseq 1.3223 0.0006
SRP064894 GAS2L3 283431 RNAseq 0.8028 0.0012
SRP133303 GAS2L3 283431 RNAseq 0.4255 0.0328
SRP159526 GAS2L3 283431 RNAseq 0.5182 0.2725
SRP193095 GAS2L3 283431 RNAseq 0.0429 0.7319
SRP219564 GAS2L3 283431 RNAseq 0.1162 0.7434
TCGA GAS2L3 283431 RNAseq 0.5639 0.0008

Upregulated datasets: 2; Downregulated datasets: 0.  

 

Survival by GAS2L3 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  

Copy number change of GAS2L3:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 GAS2L3 283431 2 2 26
GSE20123 GAS2L3 283431 2 2 26
GSE43470 GAS2L3 283431 2 0 41
GSE46452 GAS2L3 283431 9 1 49
GSE47630 GAS2L3 283431 9 1 30
GSE54993 GAS2L3 283431 0 5 65
GSE54994 GAS2L3 283431 4 2 47
GSE60625 GAS2L3 283431 0 0 11
GSE74703 GAS2L3 283431 2 0 34
GSE74704 GAS2L3 283431 1 2 17
TCGA GAS2L3 283431 19 10 67

Total number of gains: 50; Total number of losses: 25; Total Number of normals: 413.  

 

Somatic mutations of GAS2L3:

 

Generating mutation plots.

 

Highly correlated genes for GAS2L3:

 

Showing top 20/374 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
GAS2L3TMF10.673912303
GAS2L3PRPF40A0.668234303
GAS2L3FBXO50.664897707
GAS2L3E2F30.658224303
GAS2L3KIF140.653588707
GAS2L3RICTOR0.649095303
GAS2L3CFHR40.644706303
GAS2L3DDX180.638607303
GAS2L3AURKA0.63794604
GAS2L3HOXC100.631877403
GAS2L3ZFP640.630403303
GAS2L3TRPM20.628606303
GAS2L3CCNE20.627695605
GAS2L3POP10.627346403
GAS2L3NUP430.62669504
GAS2L3CEP830.625845403
GAS2L3UHRF10.624057605
GAS2L3BRI3BP0.62246303
GAS2L3DLEU20.622087404
GAS2L3CDCA20.621761503

For details and further investigation, click here