| Full name: GATA6 antisense RNA 1 (head to head) | Alias Symbol: locus5689|BM742401 | ||
| Type: non-coding RNA | Cytoband: 18q11.2 | ||
| Entrez ID: 100128893 | HGNC ID: HGNC:48840 | Ensembl Gene: ENSG00000266010 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of GATA6-AS1:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | GATA6-AS1 | 100128893 | 236118_at | 0.0662 | 0.8084 | |
| GSE26886 | GATA6-AS1 | 100128893 | 236118_at | 0.2265 | 0.0623 | |
| GSE45670 | GATA6-AS1 | 100128893 | 236118_at | -0.1667 | 0.0686 | |
| GSE53622 | GATA6-AS1 | 100128893 | 2187 | -0.5106 | 0.0524 | |
| GSE53624 | GATA6-AS1 | 100128893 | 2187 | -0.3072 | 0.1439 | |
| GSE63941 | GATA6-AS1 | 100128893 | 236118_at | -0.1048 | 0.7554 | |
| GSE77861 | GATA6-AS1 | 100128893 | 236118_at | 0.0041 | 0.9759 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by GATA6-AS1 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of GATA6-AS1:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | GATA6-AS1 | 100128893 | 3 | 6 | 21 | |
| GSE20123 | GATA6-AS1 | 100128893 | 2 | 6 | 22 | |
| GSE43470 | GATA6-AS1 | 100128893 | 2 | 1 | 40 | |
| GSE46452 | GATA6-AS1 | 100128893 | 3 | 22 | 34 | |
| GSE47630 | GATA6-AS1 | 100128893 | 7 | 17 | 16 | |
| GSE54993 | GATA6-AS1 | 100128893 | 7 | 1 | 62 | |
| GSE54994 | GATA6-AS1 | 100128893 | 3 | 12 | 38 | |
| GSE60625 | GATA6-AS1 | 100128893 | 0 | 4 | 7 | |
| GSE74703 | GATA6-AS1 | 100128893 | 2 | 1 | 33 | |
| GSE74704 | GATA6-AS1 | 100128893 | 2 | 5 | 13 |
Total number of gains: 31; Total number of losses: 75; Total Number of normals: 286.
Somatic mutations of GATA6-AS1:
Generating mutation plots.
Highly correlated genes for GATA6-AS1:
Showing top 20/23 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| GATA6-AS1 | KCNE2 | 0.744247 | 3 | 0 | 3 |
| GATA6-AS1 | LINC01208 | 0.666563 | 3 | 0 | 3 |
| GATA6-AS1 | ALDOB | 0.658321 | 3 | 0 | 3 |
| GATA6-AS1 | GKN2 | 0.640336 | 4 | 0 | 3 |
| GATA6-AS1 | FUT9 | 0.638852 | 4 | 0 | 3 |
| GATA6-AS1 | NR0B2 | 0.625605 | 4 | 0 | 3 |
| GATA6-AS1 | LGALS4 | 0.624571 | 4 | 0 | 3 |
| GATA6-AS1 | UNC13A | 0.622591 | 3 | 0 | 3 |
| GATA6-AS1 | CHGA | 0.612341 | 4 | 0 | 3 |
| GATA6-AS1 | SGK2 | 0.59349 | 3 | 0 | 3 |
| GATA6-AS1 | SERPINA5 | 0.58648 | 3 | 0 | 3 |
| GATA6-AS1 | ABHD1 | 0.58139 | 3 | 0 | 3 |
| GATA6-AS1 | CCDC149 | 0.57587 | 4 | 0 | 3 |
| GATA6-AS1 | ZFP92 | 0.575083 | 3 | 0 | 3 |
| GATA6-AS1 | OSMR | 0.569004 | 3 | 0 | 3 |
| GATA6-AS1 | MICAL3 | 0.563323 | 3 | 0 | 3 |
| GATA6-AS1 | C4BPB | 0.557494 | 3 | 0 | 3 |
| GATA6-AS1 | FGA | 0.557328 | 4 | 0 | 3 |
| GATA6-AS1 | CLDN18 | 0.542945 | 4 | 0 | 3 |
| GATA6-AS1 | M1AP | 0.538816 | 3 | 0 | 3 |
For details and further investigation, click here
