| Full name: HLA complex group 26 | Alias Symbol: bPG181B23.4|bCX205D4.4|NCRNA00191 | ||
| Type: non-coding RNA | Cytoband: 6p21.3 | ||
| Entrez ID: 352961 | HGNC ID: HGNC:29671 | Ensembl Gene: | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of HCG26:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | HCG26 | 352961 | 214186_s_at | 0.4646 | 0.3285 | |
| GSE20347 | HCG26 | 352961 | 214186_s_at | 0.0082 | 0.9410 | |
| GSE23400 | HCG26 | 352961 | 214186_s_at | 0.0533 | 0.2303 | |
| GSE26886 | HCG26 | 352961 | 214186_s_at | 0.2674 | 0.1438 | |
| GSE29001 | HCG26 | 352961 | 214186_s_at | 0.1224 | 0.6687 | |
| GSE38129 | HCG26 | 352961 | 214186_s_at | -0.0224 | 0.8083 | |
| GSE45670 | HCG26 | 352961 | 214186_s_at | 0.1667 | 0.4203 | |
| GSE63941 | HCG26 | 352961 | 214186_s_at | 0.3979 | 0.1286 | |
| GSE77861 | HCG26 | 352961 | 214186_s_at | -0.1146 | 0.2630 | |
| SRP064894 | HCG26 | 352961 | RNAseq | 0.6090 | 0.0452 | |
| SRP133303 | HCG26 | 352961 | RNAseq | 0.1223 | 0.6424 | |
| SRP159526 | HCG26 | 352961 | RNAseq | -0.4421 | 0.3978 | |
| SRP219564 | HCG26 | 352961 | RNAseq | 0.8832 | 0.1635 | |
| TCGA | HCG26 | 352961 | RNAseq | 0.4055 | 0.0653 |
Upregulated datasets: 0; Downregulated datasets: 0.
Survival by HCG26 expression:
 |
| TCGA |
Note: Click image to view full size file.
Copy number change of HCG26:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | HCG26 | 352961 | 5 | 2 | 23 | |
| GSE20123 | HCG26 | 352961 | 5 | 2 | 23 | |
| GSE43470 | HCG26 | 352961 | 5 | 1 | 37 | |
| GSE46452 | HCG26 | 352961 | 1 | 10 | 48 | |
| GSE47630 | HCG26 | 352961 | 7 | 4 | 29 | |
| GSE54993 | HCG26 | 352961 | 2 | 1 | 67 | |
| GSE54994 | HCG26 | 352961 | 11 | 4 | 38 | |
| GSE60625 | HCG26 | 352961 | 0 | 1 | 10 | |
| GSE74703 | HCG26 | 352961 | 5 | 0 | 31 | |
| GSE74704 | HCG26 | 352961 | 2 | 0 | 18 |
Total number of gains: 43; Total number of losses: 25; Total Number of normals: 324.
Somatic mutations of HCG26:
Generating mutation plots.
Highly correlated genes for HCG26:
Showing top 20/54 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| HCG26 | C8orf44 | 0.72101 | 3 | 0 | 3 |
| HCG26 | SLA | 0.675302 | 3 | 0 | 3 |
| HCG26 | CYTH4 | 0.660275 | 3 | 0 | 3 |
| HCG26 | ITGAL | 0.647921 | 4 | 0 | 4 |
| HCG26 | SIRPG | 0.638731 | 4 | 0 | 3 |
| HCG26 | PTPN7 | 0.635648 | 4 | 0 | 3 |
| HCG26 | INPP5D | 0.634543 | 3 | 0 | 3 |
| HCG26 | PTPRCAP | 0.634229 | 5 | 0 | 5 |
| HCG26 | BIN2 | 0.619898 | 3 | 0 | 3 |
| HCG26 | CD247 | 0.619293 | 5 | 0 | 4 |
| HCG26 | ISYNA1 | 0.61817 | 3 | 0 | 3 |
| HCG26 | FGR | 0.611151 | 3 | 0 | 3 |
| HCG26 | IL10RA | 0.604054 | 4 | 0 | 3 |
| HCG26 | PDCD1 | 0.602663 | 3 | 0 | 3 |
| HCG26 | CD19 | 0.60251 | 3 | 0 | 3 |
| HCG26 | EVI2B | 0.602036 | 3 | 0 | 3 |
| HCG26 | GMFG | 0.599936 | 3 | 0 | 3 |
| HCG26 | NPFF | 0.591644 | 4 | 0 | 3 |
| HCG26 | ITK | 0.590677 | 3 | 0 | 3 |
| HCG26 | IL21R | 0.589982 | 4 | 0 | 3 |
For details and further investigation, click here
