HDC

 

Full name: histidine decarboxylase Alias Symbol: 
Type: protein-coding gene Cytoband: 15q21.2
Entrez ID: 3067 HGNC ID: HGNC:4855 Ensembl Gene: ENSG00000140287 OMIM ID: 142704
Related drugs: LIXIVAPTAN, OMEPRAZOLE... [more]

 

Expression of HDC:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 HDC 3067 207067_s_at -0.4558 0.4296
GSE20347 HDC 3067 207067_s_at -0.1526 0.1314
GSE23400 HDC 3067 207067_s_at -0.2252 0.0000
GSE26886 HDC 3067 207067_s_at 0.0746 0.6771
GSE29001 HDC 3067 207067_s_at -0.2780 0.2204
GSE38129 HDC 3067 207067_s_at -0.3593 0.0027
GSE45670 HDC 3067 207067_s_at -0.8757 0.0017
GSE53622 HDC 3067 14220 -0.9443 0.0000
GSE53624 HDC 3067 14220 -1.0034 0.0000
GSE63941 HDC 3067 207067_s_at 0.0296 0.8958
GSE77861 HDC 3067 207067_s_at -0.2171 0.0308
GSE97050 HDC 3067 A_23_P117662 0.2567 0.5619
SRP064894 HDC 3067 RNAseq -0.9192 0.0582
SRP133303 HDC 3067 RNAseq -1.9480 0.0001
SRP159526 HDC 3067 RNAseq -0.8263 0.2944
SRP219564 HDC 3067 RNAseq -0.3365 0.6604
TCGA HDC 3067 RNAseq -2.4011 0.0000

Upregulated datasets: 0; Downregulated datasets: 3.  


 

Survival by HDC expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of HDC:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 HDC 3067 5 3 22
GSE20123 HDC 3067 5 3 22
GSE43470 HDC 3067 5 4 34
GSE46452 HDC 3067 3 7 49
GSE47630 HDC 3067 8 10 22
GSE54993 HDC 3067 4 6 60
GSE54994 HDC 3067 5 7 41
GSE60625 HDC 3067 4 0 7
GSE74703 HDC 3067 5 3 28
GSE74704 HDC 3067 2 3 15
TCGA HDC 3067 9 16 71

Total number of gains: 55; Total number of losses: 62; Total Number of normals: 371.  


 

Somatic mutations of HDC:

 

Generating mutation plots.

 

Highly correlated genes for HDC:

 

Showing top 20/217 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
HDCROBO30.676472303
HDCPOU1F10.675103303
HDCCTSG0.6646571108
HDCZCCHC180.651169303
HDCFTHL170.64614303
HDCTBXAS10.64181503
HDCVSIG20.635847303
HDCMS4A20.635361906
HDCNOSTRIN0.627992403
HDCRASSF10.627649403
HDCCCR60.624641604
HDCCXCR30.621686303
HDCADRA2A0.620794705
HDCC16orf890.620265505
HDCDOCK20.619245403
HDCSPATA130.618331303
HDCPLCL20.617673403
HDCGJD40.611761403
HDCPLCXD30.608389605
HDCMPZL20.607022403

For details and further investigation, click here