HERC5

 

Full name: HECT and RLD domain containing E3 ubiquitin protein ligase 5 Alias Symbol: CEB1
Type: protein-coding gene Cytoband: 4q22.1
Entrez ID: 51191 HGNC ID: HGNC:24368 Ensembl Gene: ENSG00000138646 OMIM ID: 608242
Drug and gene relationship at DGIdb

 

Expression of HERC5:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 HERC5 51191 219863_at 1.1984 0.1930
GSE20347 HERC5 51191 219863_at 1.6650 0.0000
GSE23400 HERC5 51191 219863_at 0.6155 0.0000
GSE26886 HERC5 51191 219863_at 2.6672 0.0000
GSE29001 HERC5 51191 219863_at 1.9741 0.0001
GSE38129 HERC5 51191 219863_at 1.3747 0.0000
GSE45670 HERC5 51191 219863_at 0.9772 0.0326
GSE53622 HERC5 51191 52272 1.0374 0.0000
GSE53624 HERC5 51191 52272 1.4814 0.0000
GSE63941 HERC5 51191 219863_at 0.9417 0.5012
GSE77861 HERC5 51191 219863_at 0.3649 0.4302
GSE97050 HERC5 51191 A_23_P110196 0.2850 0.3671
SRP007169 HERC5 51191 RNAseq 4.8161 0.0000
SRP064894 HERC5 51191 RNAseq 1.3087 0.0000
SRP133303 HERC5 51191 RNAseq 0.7436 0.0019
SRP159526 HERC5 51191 RNAseq 1.0652 0.0022
SRP193095 HERC5 51191 RNAseq 1.3882 0.0000
SRP219564 HERC5 51191 RNAseq 0.8104 0.0873
TCGA HERC5 51191 RNAseq 0.2776 0.0525

Upregulated datasets: 10; Downregulated datasets: 0.  


 

Survival by HERC5 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of HERC5:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 HERC5 51191 2 12 16
GSE20123 HERC5 51191 2 12 16
GSE43470 HERC5 51191 0 13 30
GSE46452 HERC5 51191 1 36 22
GSE47630 HERC5 51191 0 20 20
GSE54993 HERC5 51191 8 0 62
GSE54994 HERC5 51191 1 10 42
GSE60625 HERC5 51191 0 0 11
GSE74703 HERC5 51191 0 11 25
GSE74704 HERC5 51191 1 7 12
TCGA HERC5 51191 12 37 47

Total number of gains: 27; Total number of losses: 158; Total Number of normals: 303.  


 

Somatic mutations of HERC5:

 

Generating mutation plots.

 

Highly correlated genes for HERC5:

 

Showing top 20/1376 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
HERC5CD800.808689303
HERC5DDX600.80393812012
HERC5IFI440.8037812012
HERC5RNF2130.784014303
HERC5IFI350.76726913012
HERC5IFIT10.76142813012
HERC5IFITM10.75618310010
HERC5IFI60.7556312011
HERC5USP410.751173303
HERC5FCGR3A0.75006303
HERC5CMPK20.747257807
HERC5IFIT30.74624313012
HERC5IFI44L0.74550113011
HERC5RSAD20.72861312011
HERC5FCHO10.727148303
HERC5CAPN120.725586303
HERC5RTP40.72351312012
HERC5ISG150.72338112011
HERC5ADAR0.7208431109
HERC5DDX60L0.717563605

For details and further investigation, click here