| Full name: ring finger protein 213 | Alias Symbol: KIAA1554|NET57|ALO17 | ||
| Type: protein-coding gene | Cytoband: 17q25.3 | ||
| Entrez ID: 57674 | HGNC ID: HGNC:14539 | Ensembl Gene: ENSG00000173821 | OMIM ID: 613768 |
| Drug and gene relationship at DGIdb | |||
Expression of RNF213:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | RNF213 | 57674 | 225929_s_at | 0.4824 | 0.4428 | |
| GSE26886 | RNF213 | 57674 | 225929_s_at | 0.0204 | 0.9448 | |
| GSE45670 | RNF213 | 57674 | 225929_s_at | 0.8604 | 0.0009 | |
| GSE63941 | RNF213 | 57674 | 225929_s_at | -0.4607 | 0.3237 | |
| GSE77861 | RNF213 | 57674 | 225929_s_at | 0.3961 | 0.1950 | |
| GSE97050 | RNF213 | A_19_P00804072 | 0.5048 | 0.2071 | ||
| SRP007169 | RNF213 | 57674 | RNAseq | 1.6577 | 0.0002 | |
| SRP008496 | RNF213 | 57674 | RNAseq | 1.1510 | 0.0000 | |
| SRP064894 | RNF213 | 57674 | RNAseq | 0.7739 | 0.0000 | |
| SRP133303 | RNF213 | 57674 | RNAseq | 0.3872 | 0.0236 | |
| SRP159526 | RNF213 | 57674 | RNAseq | -0.0326 | 0.9107 | |
| SRP193095 | RNF213 | 57674 | RNAseq | 0.7707 | 0.0001 | |
| SRP219564 | RNF213 | 57674 | RNAseq | 0.6893 | 0.1008 | |
| TCGA | RNF213 | 57674 | RNAseq | 0.0522 | 0.3129 |
Upregulated datasets: 2; Downregulated datasets: 0.
Survival by RNF213 expression:
 |
| TCGA |
Note: Click image to view full size file.
Copy number change of RNF213:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | RNF213 | 57674 | 4 | 3 | 23 | |
| GSE20123 | RNF213 | 57674 | 4 | 3 | 23 | |
| GSE43470 | RNF213 | 57674 | 3 | 5 | 35 | |
| GSE46452 | RNF213 | 57674 | 34 | 0 | 25 | |
| GSE47630 | RNF213 | 57674 | 9 | 1 | 30 | |
| GSE54993 | RNF213 | 57674 | 2 | 5 | 63 | |
| GSE54994 | RNF213 | 57674 | 10 | 6 | 37 | |
| GSE60625 | RNF213 | 57674 | 6 | 0 | 5 | |
| GSE74703 | RNF213 | 57674 | 3 | 3 | 30 | |
| GSE74704 | RNF213 | 57674 | 4 | 3 | 13 | |
| TCGA | RNF213 | 57674 | 28 | 10 | 58 |
Total number of gains: 107; Total number of losses: 39; Total Number of normals: 342.
Somatic mutations of RNF213:
Generating mutation plots.
Highly correlated genes for RNF213:
Showing top 20/319 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| RNF213 | PLSCR1 | 0.824157 | 3 | 0 | 3 |
| RNF213 | LY6E | 0.815675 | 3 | 0 | 3 |
| RNF213 | OAS2 | 0.79853 | 4 | 0 | 4 |
| RNF213 | BST2 | 0.792079 | 3 | 0 | 3 |
| RNF213 | HERC5 | 0.784014 | 3 | 0 | 3 |
| RNF213 | IRF7 | 0.776614 | 3 | 0 | 3 |
| RNF213 | ADAM17 | 0.764619 | 3 | 0 | 3 |
| RNF213 | APOBEC3G | 0.759452 | 3 | 0 | 3 |
| RNF213 | ATP13A1 | 0.75687 | 3 | 0 | 3 |
| RNF213 | USP18 | 0.754332 | 4 | 0 | 3 |
| RNF213 | PRDM15 | 0.747687 | 3 | 0 | 3 |
| RNF213 | TAP1 | 0.744901 | 5 | 0 | 4 |
| RNF213 | ADAR | 0.740073 | 4 | 0 | 4 |
| RNF213 | ZNF618 | 0.733935 | 3 | 0 | 3 |
| RNF213 | LLPH | 0.732734 | 3 | 0 | 3 |
| RNF213 | DPP7 | 0.727827 | 3 | 0 | 3 |
| RNF213 | LIMK1 | 0.724551 | 3 | 0 | 3 |
| RNF213 | PARP14 | 0.724503 | 5 | 0 | 4 |
| RNF213 | PSMB8 | 0.723773 | 5 | 0 | 4 |
| RNF213 | PRR13 | 0.721573 | 4 | 0 | 4 |
For details and further investigation, click here
