| Full name: homeobox A13 | Alias Symbol: | ||
| Type: protein-coding gene | Cytoband: 7p15.2 | ||
| Entrez ID: 3209 | HGNC ID: HGNC:5102 | Ensembl Gene: ENSG00000106031 | OMIM ID: 142959 |
| Drug and gene relationship at DGIdb | |||
Expression of HOXA13:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | HOXA13 | 3209 | 238571_at | 0.0047 | 0.9905 | |
| GSE26886 | HOXA13 | 3209 | 238571_at | 0.5076 | 0.0027 | |
| GSE45670 | HOXA13 | 3209 | 238571_at | 0.3122 | 0.0132 | |
| GSE53622 | HOXA13 | 3209 | 20449 | 3.6340 | 0.0000 | |
| GSE53624 | HOXA13 | 3209 | 20449 | 3.4495 | 0.0000 | |
| GSE63941 | HOXA13 | 3209 | 238808_at | 1.2339 | 0.0509 | |
| GSE77861 | HOXA13 | 3209 | 238571_at | 0.0174 | 0.8765 | |
| GSE97050 | HOXA13 | 3209 | A_23_P389281 | 0.4719 | 0.3594 | |
| SRP159526 | HOXA13 | 3209 | RNAseq | 8.6614 | 0.0000 | |
| TCGA | HOXA13 | 3209 | RNAseq | 4.1908 | 0.0000 |
Upregulated datasets: 4; Downregulated datasets: 0.
Survival by HOXA13 expression:
 |  |  |
| GSE53622 | GSE53624 | TCGA |
Note: Click image to view full size file.
Copy number change of HOXA13:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | HOXA13 | 3209 | 16 | 1 | 13 | |
| GSE20123 | HOXA13 | 3209 | 16 | 1 | 13 | |
| GSE43470 | HOXA13 | 3209 | 4 | 0 | 39 | |
| GSE46452 | HOXA13 | 3209 | 10 | 2 | 47 | |
| GSE47630 | HOXA13 | 3209 | 8 | 1 | 31 | |
| GSE54993 | HOXA13 | 3209 | 0 | 6 | 64 | |
| GSE54994 | HOXA13 | 3209 | 21 | 2 | 30 | |
| GSE60625 | HOXA13 | 3209 | 0 | 0 | 11 | |
| GSE74703 | HOXA13 | 3209 | 4 | 0 | 32 | |
| GSE74704 | HOXA13 | 3209 | 10 | 1 | 9 | |
| TCGA | HOXA13 | 3209 | 55 | 6 | 35 |
Total number of gains: 144; Total number of losses: 20; Total Number of normals: 324.
Somatic mutations of HOXA13:
Generating mutation plots.
Highly correlated genes for HOXA13:
Showing top 20/384 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| HOXA13 | ZIC5 | 0.717176 | 4 | 0 | 4 |
| HOXA13 | VAX1 | 0.69218 | 3 | 0 | 3 |
| HOXA13 | HOXD13 | 0.664894 | 4 | 0 | 4 |
| HOXA13 | GTSE1 | 0.645223 | 4 | 0 | 4 |
| HOXA13 | FANCB | 0.64231 | 4 | 0 | 3 |
| HOXA13 | NR2C2AP | 0.637935 | 3 | 0 | 3 |
| HOXA13 | LHX2 | 0.635666 | 6 | 0 | 4 |
| HOXA13 | SPP1 | 0.629786 | 4 | 0 | 3 |
| HOXA13 | ACTL6A | 0.629692 | 6 | 0 | 5 |
| HOXA13 | SIX1 | 0.629357 | 6 | 0 | 4 |
| HOXA13 | ORC3 | 0.629172 | 5 | 0 | 5 |
| HOXA13 | PXYLP1 | 0.62676 | 3 | 0 | 3 |
| HOXA13 | IFI27L2 | 0.625685 | 4 | 0 | 3 |
| HOXA13 | MTIF2 | 0.624604 | 3 | 0 | 3 |
| HOXA13 | SNX10 | 0.622829 | 5 | 0 | 4 |
| HOXA13 | KIF7 | 0.620765 | 4 | 0 | 3 |
| HOXA13 | HOXD11 | 0.617043 | 6 | 0 | 5 |
| HOXA13 | HOXA11-AS | 0.615533 | 4 | 0 | 3 |
| HOXA13 | PDGFA | 0.614925 | 4 | 0 | 4 |
| HOXA13 | SNAP47 | 0.614494 | 3 | 0 | 3 |
For details and further investigation, click here
