HS6ST1

 

Full name: heparan sulfate 6-O-sulfotransferase 1 Alias Symbol: 
Type: protein-coding gene Cytoband: 2q14.3
Entrez ID: 9394 HGNC ID: HGNC:5201 Ensembl Gene: ENSG00000136720 OMIM ID: 604846
Drug and gene relationship at DGIdb
Screen Evidence:

 

Expression of HS6ST1:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 HS6ST1 9394 225263_at 0.8254 0.0986
GSE20347 HS6ST1 9394 206997_s_at -0.0313 0.7629
GSE23400 HS6ST1 9394 206997_s_at 0.0043 0.9271
GSE26886 HS6ST1 9394 225263_at 0.4672 0.1639
GSE29001 HS6ST1 9394 206997_s_at -0.0606 0.6572
GSE38129 HS6ST1 9394 206997_s_at -0.0974 0.5676
GSE45670 HS6ST1 9394 225263_at 0.5734 0.0000
GSE53622 HS6ST1 9394 134937 0.2350 0.0122
GSE53624 HS6ST1 9394 134937 0.2938 0.0000
GSE63941 HS6ST1 9394 225263_at -0.2850 0.5163
GSE77861 HS6ST1 9394 225263_at 0.2161 0.3148
GSE97050 HS6ST1 9394 A_24_P8220 0.1729 0.6268
SRP007169 HS6ST1 9394 RNAseq 1.0648 0.0670
SRP008496 HS6ST1 9394 RNAseq 0.9034 0.0103
SRP064894 HS6ST1 9394 RNAseq 0.1180 0.4825
SRP133303 HS6ST1 9394 RNAseq 0.2758 0.2080
SRP159526 HS6ST1 9394 RNAseq 1.0067 0.0023
SRP193095 HS6ST1 9394 RNAseq 0.2887 0.1849
SRP219564 HS6ST1 9394 RNAseq -0.0777 0.8555
TCGA HS6ST1 9394 RNAseq 0.3060 0.0000

Upregulated datasets: 1; Downregulated datasets: 0.  


 

Survival by HS6ST1 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of HS6ST1:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 HS6ST1 9394 6 3 21
GSE20123 HS6ST1 9394 6 3 21
GSE43470 HS6ST1 9394 2 1 40
GSE46452 HS6ST1 9394 1 3 55
GSE47630 HS6ST1 9394 6 0 34
GSE54993 HS6ST1 9394 0 6 64
GSE54994 HS6ST1 9394 11 0 42
GSE60625 HS6ST1 9394 0 3 8
GSE74703 HS6ST1 9394 2 1 33
GSE74704 HS6ST1 9394 3 1 16
TCGA HS6ST1 9394 22 8 66

Total number of gains: 59; Total number of losses: 29; Total Number of normals: 400.  


 

Somatic mutations of HS6ST1:

 

Generating mutation plots.

 

Highly correlated genes for HS6ST1:

 

Showing top 20/487 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
HS6ST1ZNF6800.790369303
HS6ST1OPLAH0.763658303
HS6ST1ARMC80.753501303
HS6ST1TMTC40.747192404
HS6ST1NUDCD10.743999303
HS6ST1XPNPEP30.742761404
HS6ST1ZAP700.73941303
HS6ST1ACVR1C0.738912303
HS6ST1NCOA60.736181303
HS6ST1C8A0.731235303
HS6ST1P2RX60.731185303
HS6ST1ZC3H30.727616303
HS6ST1KSR10.723427303
HS6ST1NACC10.720694303
HS6ST1IER3IP10.720141303
HS6ST1SLC22A50.718169303
HS6ST1SSBP40.715054303
HS6ST1SLC5A30.713953303
HS6ST1KNOP10.711061303
HS6ST1C10orf950.708966404

For details and further investigation, click here