KDM6A

 

Full name: lysine demethylase 6A Alias Symbol: 
Type: protein-coding gene Cytoband: Xp11.3
Entrez ID: 7403 HGNC ID: HGNC:12637 Ensembl Gene: ENSG00000147050 OMIM ID: 300128
Drug and gene relationship at DGIdb
Screen Evidence:
  • This gene has been idenfitied as a common driver in this paper.
  • Knocking out of this gene by CRIPR/Cas9 screen found altered tolerance on DNA toxicity in Genotoxic Screens.

 

Expression of KDM6A:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 KDM6A 7403 203992_s_at -0.0385 0.9779
GSE20347 KDM6A 7403 203992_s_at -0.9508 0.0001
GSE23400 KDM6A 7403 203992_s_at -0.3125 0.0014
GSE26886 KDM6A 7403 203992_s_at -1.9072 0.0000
GSE29001 KDM6A 7403 203991_s_at -0.6029 0.1493
GSE38129 KDM6A 7403 203991_s_at -0.7220 0.0008
GSE45670 KDM6A 7403 203992_s_at -0.5627 0.0500
GSE53622 KDM6A 7403 75558 -0.2203 0.0501
GSE53624 KDM6A 7403 75558 -0.6282 0.0000
GSE63941 KDM6A 7403 203992_s_at -0.2178 0.8153
GSE77861 KDM6A 7403 203992_s_at -0.3046 0.4327
GSE97050 KDM6A 7403 A_33_P3340718 -0.0261 0.9206
SRP007169 KDM6A 7403 RNAseq -1.0210 0.0593
SRP008496 KDM6A 7403 RNAseq -1.0166 0.0019
SRP064894 KDM6A 7403 RNAseq -0.8231 0.0010
SRP133303 KDM6A 7403 RNAseq -0.0986 0.6509
SRP159526 KDM6A 7403 RNAseq -0.2949 0.3796
SRP193095 KDM6A 7403 RNAseq -0.4450 0.0019
SRP219564 KDM6A 7403 RNAseq -0.3164 0.5369
TCGA KDM6A 7403 RNAseq -0.2180 0.0026

Upregulated datasets: 0; Downregulated datasets: 2.  


 

Survival by KDM6A expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of KDM6A:

 

No record found for this gene.


 

Somatic mutations of KDM6A:

 

Generating mutation plots.

 

Highly correlated genes for KDM6A:

 

Showing top 20/563 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
KDM6AZMAT20.754531303
KDM6AMBOAT10.754465303
KDM6ASOX60.731121303
KDM6ASTX190.687873303
KDM6AFAR10.687725504
KDM6AGSTK10.680754303
KDM6AOMA10.675776303
KDM6AMUC200.673786504
KDM6ALIN7C0.670909505
KDM6ACYB5R40.66205303
KDM6ASSBP20.655338404
KDM6ATP53INP20.655305404
KDM6ARHD0.654372303
KDM6AFAM135A0.652462403
KDM6ATMEM120A0.651006404
KDM6ALANCL30.650156404
KDM6AZNF930.650096303
KDM6AADIPOR20.646029504
KDM6ANHP20.644669403
KDM6AGID40.64343303

For details and further investigation, click here