KDR

 

Full name: kinase insert domain receptor Alias Symbol: FLK1|VEGFR|VEGFR2|CD309
Type: protein-coding gene Cytoband: 4q12
Entrez ID: 3791 HGNC ID: HGNC:6307 Ensembl Gene: ENSG00000128052 OMIM ID: 191306
Drug and gene relationship at DGIdb

 

KDR involved pathways:

KEGG pathway Description View
hsa04014Ras signaling pathway
hsa04015Rap1 signaling pathway
hsa04151PI3K-Akt signaling pathway
hsa04370VEGF signaling pathway
hsa04510Focal adhesion
hsa05205Proteoglycans in cancer

 

Expression of KDR:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 KDR 3791 203934_at 0.2288 0.7749
GSE20347 KDR 3791 203934_at -0.0819 0.4191
GSE23400 KDR 3791 203934_at 0.0644 0.0909
GSE26886 KDR 3791 203934_at -0.6182 0.0631
GSE29001 KDR 3791 203934_at -0.3326 0.2234
GSE38129 KDR 3791 203934_at -0.1330 0.3893
GSE45670 KDR 3791 203934_at -0.1947 0.4507
GSE53622 KDR 3791 40284 -0.1131 0.2244
GSE53624 KDR 3791 40284 0.0624 0.5694
GSE63941 KDR 3791 203934_at -0.2410 0.6708
GSE77861 KDR 3791 203934_at 0.1387 0.4193
GSE97050 KDR 3791 A_24_P71973 0.2725 0.4428
SRP007169 KDR 3791 RNAseq 1.2293 0.0088
SRP008496 KDR 3791 RNAseq 1.1377 0.0028
SRP064894 KDR 3791 RNAseq 0.3521 0.2922
SRP133303 KDR 3791 RNAseq 0.0949 0.5020
SRP159526 KDR 3791 RNAseq 0.0266 0.9563
SRP193095 KDR 3791 RNAseq 0.3719 0.0348
SRP219564 KDR 3791 RNAseq -0.0248 0.9690
TCGA KDR 3791 RNAseq -0.4272 0.0001

Upregulated datasets: 2; Downregulated datasets: 0.  


 

Survival by KDR expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of KDR:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 KDR 3791 3 11 16
GSE20123 KDR 3791 2 11 17
GSE43470 KDR 3791 0 14 29
GSE46452 KDR 3791 1 36 22
GSE47630 KDR 3791 1 18 21
GSE54993 KDR 3791 7 0 63
GSE54994 KDR 3791 2 10 41
GSE60625 KDR 3791 0 0 11
GSE74703 KDR 3791 0 12 24
GSE74704 KDR 3791 1 6 13
TCGA KDR 3791 20 26 50

Total number of gains: 37; Total number of losses: 144; Total Number of normals: 307.  


 

Somatic mutations of KDR:

 

Generating mutation plots.

 

Highly correlated genes for KDR:

 

Showing top 20/287 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
KDRROBO40.710145404
KDRTM4SF180.696242605
KDRRASGRF20.686877303
KDRRASGRP30.679025605
KDRPLEK0.669237404
KDRPLVAP0.662631009
KDRFLI10.662188505
KDRCCDC102B0.645138504
KDRSLC39A70.642319303
KDRTEK0.64026605
KDRTUBB2B0.633947303
KDRENPP20.632386706
KDRCD930.6312451007
KDRCLEC14A0.623602505
KDRRAMP20.622358605
KDRACVRL10.621838605
KDRSTAB10.621778605
KDRBCL6B0.619144303
KDRTIE10.6189311107
KDRPECAM10.61777908

For details and further investigation, click here