LEAP2

 

Full name: liver enriched antimicrobial peptide 2 Alias Symbol: LEAP-2
Type: protein-coding gene Cytoband: 5q31.1
Entrez ID: 116842 HGNC ID: HGNC:29571 Ensembl Gene: ENSG00000164406 OMIM ID: 611373
Drug and gene relationship at DGIdb

 

Expression of LEAP2:

 

Dataset Gene EntrezID Probe Log2FC Adj.pValue Expression
GSE17351 LEAP2 116842 1552362_a_at -0.2432 0.5263
GSE26886 LEAP2 116842 1552362_a_at -0.7265 0.0079
GSE45670 LEAP2 116842 1552362_a_at -0.1007 0.7428
GSE53622 LEAP2 116842 64000 -0.5890 0.0000
GSE53624 LEAP2 116842 9111 -0.2493 0.0053
GSE63941 LEAP2 116842 1552362_a_at 0.9164 0.0457
GSE77861 LEAP2 116842 1552362_a_at -0.0602 0.4943
GSE97050 LEAP2 116842 A_33_P3341259 -0.6996 0.1236
SRP133303 LEAP2 116842 RNAseq -0.9681 0.0000
SRP159526 LEAP2 116842 RNAseq -0.0343 0.9539
SRP193095 LEAP2 116842 RNAseq -0.8848 0.0000
SRP219564 LEAP2 116842 RNAseq -0.3618 0.4044
TCGA LEAP2 116842 RNAseq -1.2000 0.0005

Upregulated datasets: 0; Downregulated datasets: 1.  


 

Survival by LEAP2 expression:

 

GSE53622GSE53624TCGA

 

Note: Click image to view full size file.  


Copy number change of LEAP2:

 

Dataset Gene EntrezID Gain Loss Normal Detail
GSE15526 LEAP2 116842 1 11 18
GSE20123 LEAP2 116842 2 11 17
GSE43470 LEAP2 116842 2 9 32
GSE46452 LEAP2 116842 0 27 32
GSE47630 LEAP2 116842 0 21 19
GSE54993 LEAP2 116842 9 1 60
GSE54994 LEAP2 116842 2 14 37
GSE60625 LEAP2 116842 0 0 11
GSE74703 LEAP2 116842 2 6 28
GSE74704 LEAP2 116842 1 5 14
TCGA LEAP2 116842 3 39 54

Total number of gains: 22; Total number of losses: 144; Total Number of normals: 322.  


 

Somatic mutations of LEAP2:

 

Generating mutation plots.

 

Highly correlated genes for LEAP2:

 

Showing top 20/39 corelated genes with mean PCC>0.5.
Gene1 Gene2 Mean PCC Num. Datasets Num. PCC<0 Num. PCC>0.5
LEAP2ACACB0.672005303
LEAP2PPP1CB0.666254303
LEAP2BTC0.634873303
LEAP2RAD23B0.634248303
LEAP2STX190.630175303
LEAP2ANK30.629132404
LEAP2AIF1L0.623167303
LEAP2MYL50.617681403
LEAP2PYGM0.615384303
LEAP2RMND5A0.614285403
LEAP2MPZL30.610313303
LEAP2TMEM1250.610112303
LEAP2DCAF80.609193403
LEAP2NDUFV30.601903303
LEAP2ADCYAP1R10.595404303
LEAP2C1orf560.593831303
LEAP2MYOT0.593193303
LEAP2NEBL0.590653303
LEAP2PPARGC1A0.589236303
LEAP2GABPA0.588782303

For details and further investigation, click here