| Full name: long intergenic non-protein coding RNA 1116 | Alias Symbol: TALNEC2 | ||
| Type: non-coding RNA | Cytoband: 2q31.1 | ||
| Entrez ID: 375295 | HGNC ID: HGNC:49259 | Ensembl Gene: ENSG00000163364 | OMIM ID: |
| Drug and gene relationship at DGIdb | |||
Expression of LINC01116:
| Dataset | Gene | EntrezID | Probe | Log2FC | Adj.pValue | Expression |
|---|---|---|---|---|---|---|
| GSE17351 | LINC01116 | 375295 | 228564_at | 1.8389 | 0.0632 | |
| GSE26886 | LINC01116 | 375295 | 228564_at | 1.9249 | 0.0000 | |
| GSE45670 | LINC01116 | 375295 | 228564_at | 0.5191 | 0.3374 | |
| GSE53622 | LINC01116 | 375295 | 53530 | 1.1274 | 0.0000 | |
| GSE53624 | LINC01116 | 375295 | 53530 | 1.7778 | 0.0000 | |
| GSE63941 | LINC01116 | 375295 | 228564_at | 0.4685 | 0.7549 | |
| GSE77861 | LINC01116 | 375295 | 228564_at | 0.3162 | 0.1823 | |
| SRP064894 | LINC01116 | 375295 | RNAseq | 1.5994 | 0.0000 | |
| SRP133303 | LINC01116 | 375295 | RNAseq | 0.8664 | 0.0001 | |
| SRP159526 | LINC01116 | 375295 | RNAseq | 1.6825 | 0.0023 | |
| SRP219564 | LINC01116 | 375295 | RNAseq | 1.5755 | 0.0053 |
Upregulated datasets: 6; Downregulated datasets: 0.
Survival by LINC01116 expression:
 |  |
| GSE53622 | GSE53624 |
Note: Click image to view full size file.
Copy number change of LINC01116:
| Dataset | Gene | EntrezID | Gain | Loss | Normal | Detail |
|---|---|---|---|---|---|---|
| GSE15526 | LINC01116 | 375295 | 10 | 0 | 20 | |
| GSE20123 | LINC01116 | 375295 | 10 | 0 | 20 | |
| GSE43470 | LINC01116 | 375295 | 5 | 1 | 37 | |
| GSE46452 | LINC01116 | 375295 | 1 | 4 | 54 | |
| GSE47630 | LINC01116 | 375295 | 4 | 4 | 32 | |
| GSE54993 | LINC01116 | 375295 | 0 | 5 | 65 | |
| GSE54994 | LINC01116 | 375295 | 12 | 3 | 38 | |
| GSE60625 | LINC01116 | 375295 | 0 | 3 | 8 | |
| GSE74703 | LINC01116 | 375295 | 4 | 1 | 31 | |
| GSE74704 | LINC01116 | 375295 | 6 | 0 | 14 |
Total number of gains: 52; Total number of losses: 21; Total Number of normals: 319.
Somatic mutations of LINC01116:
Generating mutation plots.
Highly correlated genes for LINC01116:
Showing top 20/432 corelated genes with mean PCC>0.5.
| Gene1 | Gene2 | Mean PCC | Num. Datasets | Num. PCC<0 | Num. PCC>0.5 |
|---|---|---|---|---|---|
| LINC01116 | CEP250 | 0.772102 | 3 | 0 | 3 |
| LINC01116 | NCAPG | 0.726398 | 3 | 0 | 3 |
| LINC01116 | ANKRD23 | 0.721469 | 3 | 0 | 3 |
| LINC01116 | IQCB1 | 0.721308 | 3 | 0 | 3 |
| LINC01116 | CIC | 0.71393 | 3 | 0 | 3 |
| LINC01116 | DBR1 | 0.701827 | 3 | 0 | 3 |
| LINC01116 | PGM2L1 | 0.687234 | 3 | 0 | 3 |
| LINC01116 | ALKBH6 | 0.686242 | 3 | 0 | 3 |
| LINC01116 | HOXD8 | 0.68591 | 6 | 0 | 5 |
| LINC01116 | NCOR2 | 0.684146 | 3 | 0 | 3 |
| LINC01116 | TLK1 | 0.684066 | 3 | 0 | 3 |
| LINC01116 | PRR12 | 0.680275 | 3 | 0 | 3 |
| LINC01116 | SRM | 0.674058 | 3 | 0 | 3 |
| LINC01116 | MFAP2 | 0.667537 | 5 | 0 | 5 |
| LINC01116 | MBD3 | 0.665781 | 3 | 0 | 3 |
| LINC01116 | CPNE8 | 0.665235 | 3 | 0 | 3 |
| LINC01116 | RRP15 | 0.664129 | 3 | 0 | 3 |
| LINC01116 | TMEM223 | 0.66161 | 3 | 0 | 3 |
| LINC01116 | LAPTM4B | 0.661447 | 4 | 0 | 4 |
| LINC01116 | YEATS2 | 0.657275 | 5 | 0 | 3 |
For details and further investigation, click here
